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L1_007_000M1_scaffold_3021

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3021_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1083)
DNA (1083bp) protein (361aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1X7_9FIRM
L1_007_000M1_scaffold_3021_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1088..2017)
DNA (930bp) protein (310aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Methionyl-tRNA formyltransferase n=3 Tax=Clostridiales RepID=D4MV91_9FIRM
L1_007_000M1_scaffold_3021_3
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2019..2498)
DNA (480bp) protein (160aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Peptide deformylase n=5 Tax=Clostridiales RepID=D4MV90_9FIRM
L1_007_000M1_scaffold_3021_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2517..4742)
DNA (2226bp) protein (742aa)
replication restart DNA helicase PriA (EC:3.6.1.-)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Primosomal protein N n=2 Tax=Lachnospiraceae RepID=E5VLP6_9FIRM
L1_007_000M1_scaffold_3021_5
unknown

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comp(4746..6098)
DNA (1353bp) protein (451aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphoglucosamine mutase n=5 Tax=Clostridiales RepID=D4MV88_9FIRM
L1_007_000M1_scaffold_3021_6
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6196..7032)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16235.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted integral membrane protein
L1_007_000M1_scaffold_3021_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7160..8098)
DNA (939bp) protein (313aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit n=5 Tax=Clostridiales RepID=D4MV86_9FIRM
Transketolase, pyridine binding domain protein {ECO:0000313|EMBL:EKY21897.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_3021_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8100..8933)
DNA (834bp) protein (278aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase n=4 Tax=Clostridiales RepID=E5VLQ0_9FIRM
Transketolase {ECO:0000313|EMBL:EFV16237.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_007_000M1_scaffold_3021_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8940..9596)
DNA (657bp) protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1M8_9FIRM
L1_007_000M1_scaffold_3021_10
unknown

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9935..11035
DNA (1101bp) protein (367aa)
Transcriptional regulator, LacI family n=2 Tax=Clostridiales RepID=D4MV84_9FIRM
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CBL39300.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Displaying 10 items

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