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L1_007_000M1_scaffold_3382

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3382_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..224)
DNA (222bp) protein (74aa)
Transcription elongation factor GreA n=5 Tax=Clostridiales RepID=D4MUC2_9FIRM
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_3382_2
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(294..1292)
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
tRNA-dihydrouridine synthase n=4 Tax=Clostridiales RepID=D4MUC1_9FIRM
tRNA-U20-dihydrouridine synthase
L1_007_000M1_scaffold_3382_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1279..2043)
DNA (765bp) protein (255aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Type III pantothenate kinase n=5 Tax=Clostridiales RepID=D4MUC0_9FIRM
L1_007_000M1_scaffold_3382_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2047..2379)
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P4K9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31247.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_007_000M1_scaffold_3382_5
unknown

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comp(2425..3405)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=4 Tax=Clostridiales RepID=D4MUB8_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3382_6
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3421..4374)
DNA (954bp) protein (318aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Ornithine carbamoyltransferase n=3 Tax=Clostridiales RepID=D4MUB7_9FIRM
L1_007_000M1_scaffold_3382_7
unknown

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comp(4487..5137)
DNA (651bp) protein (217aa)
Lysophospholipase L1 and related esterases (EC:3.1.1.2)
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CBL38982.1}; EC=3.1.1.2 {ECO:0000313|EMBL:CBL38982.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Lysophospholipase L1 and related esterases n=5 Tax=Clostridiales RepID=D4MUB6_9FIRM
L1_007_000M1_scaffold_3382_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5242..6228)
DNA (987bp) protein (329aa)
Membrane protease subunits, stomatin/prohibitin homologs n=5 Tax=Clostridiales RepID=D4MUB5_9FIRM
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:CDA31243.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Membrane protease subunits, stomatin/prohibitin homologs
L1_007_000M1_scaffold_3382_9
unknown

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comp(6230..6661)
DNA (432bp) protein (144aa)
Membrane protein implicated in regulation of membrane protease activity n=2 Tax=Clostridiales RepID=D4MUB4_9FIRM
Membrane protein implicated in regulation of membrane protease activity
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:CBL38980.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3382_10
unknown

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comp(6662..7435)
DNA (774bp) protein (258aa)
rRNA methylases n=4 Tax=Clostridiales RepID=D4MUB3_9FIRM
rRNA methylases
rRNA methylases {ECO:0000313|EMBL:CBL38979.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3382_11
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7458..8057)
DNA (600bp) protein (200aa)
TrkA-N domain-containing protein n=2 Tax=Lachnospiraceae RepID=E5VPA9_9FIRM
TrkA-N domain-containing protein {ECO:0000313|EMBL:EFV15322.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
K+ transport systems, NAD-binding component
L1_007_000M1_scaffold_3382_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8111..9463)
DNA (1353bp) protein (451aa)
Potassium uptake protein, TrkH family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QCD3_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EKY25643.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Trk-type K+ transport systems, membrane components
L1_007_000M1_scaffold_3382_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9535..10524)
DNA (990bp) protein (330aa)
6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
6-phosphofructokinase n=5 Tax=Clostridiales RepID=D4MUB0_9FIRM
L1_007_000M1_scaffold_3382_14
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10612..14067)
DNA (3456bp) protein (1152aa)
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
DNA polymerase III catalytic subunit, DnaE type n=4 Tax=Clostridiales RepID=D4MUA9_9FIRM
L1_007_000M1_scaffold_3382_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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14229..15587
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Lachnospiraceae RepID=E5VPB3_9FIRM
L1_007_000M1_scaffold_3382_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16013..17716
DNA (1704bp) protein (568aa)
Carbon starvation protein, predicted membrane protein n=4 Tax=Clostridiales RepID=D4MUA7_9FIRM
Carbon starvation protein CstA {ECO:0000313|EMBL:EFV15327.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Carbon starvation protein, predicted membrane protein
Displaying 16 items

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