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L1_007_000M1_scaffold_3640

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3640_1
unknown

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188..1135
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MUF7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39023.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3640_2
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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1159..2370
DNA (1212bp) protein (404aa)
Bacterial pre-peptidase domain protein n=3 Tax=Anaerostipes RepID=B0MAR5_9FIRM
Pre-peptidase domain-containing protein {ECO:0000313|EMBL:EFV21225.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
hypothetical protein
L1_007_000M1_scaffold_3640_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2691..2855
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JXY1_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
LSU ribosomal protein L33P
L1_007_000M1_scaffold_3640_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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2895..3092
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=3 Tax=Lachnospiraceae RepID=E5VMS5_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
preprotein translocase, SecE subunit, bacterial
L1_007_000M1_scaffold_3640_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3108..3653
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=4 Tax=Clostridiales RepID=D4MUG0_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_007_000M1_scaffold_3640_6
unknown

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3739..4164
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=5 Tax=Clostridiales RepID=D4MUG1_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3640_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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4228..4920
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=5 Tax=Clostridiales RepID=D4MUG2_9FIRM
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_007_000M1_scaffold_3640_8
unknown

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5055..5159
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_000M1_scaffold_3640_9
unknown

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5243..5746
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=4 Tax=Clostridiales RepID=D4MUG3_9FIRM
LSU ribosomal protein L10P
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3640_10
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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5789..6151
DNA (363bp) protein (121aa)
50S ribosomal protein L7/L12 n=5 Tax=Firmicutes RepID=D4MUG4_9FIRM
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L1_007_000M1_scaffold_3640_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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6360..7304
DNA (945bp) protein (315aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Putative glycerate dehydrogenase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PXK7_9FIRM
Putative glycerate dehydrogenase {ECO:0000313|EMBL:EKY20433.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_3640_12
unknown

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7347..8708
DNA (1362bp) protein (454aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=2 Tax=Clostridiales RepID=D4MUG6_9FIRM
Cell wall-associated hydrolases (invasion-associated proteins)
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CBL39032.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_3640_13
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9046..10347
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Phosphomethylpyrimidine synthase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMR7_9FIRM
hydroxymethylpyrimidine synthase
L1_007_000M1_scaffold_3640_14
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10468..11730
DNA (1263bp) protein (421aa)
Transporter n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMR6_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Displaying 14 items

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