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L1_007_000M1_scaffold_2193

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2193_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(294..1151)
DNA (858bp) protein (286aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=4 Tax=Clostridiales RepID=D4MVC8_9FIRM
L1_007_000M1_scaffold_2193_2
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1364..2302
DNA (939bp) protein (313aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJK5_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
L1_007_000M1_scaffold_2193_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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2731..4476
DNA (1746bp) protein (582aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=5 Tax=Clostridiales RepID=D4MVD5_9FIRM
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CDA33262.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_007_000M1_scaffold_2193_4
unknown

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4606..5037
DNA (432bp) protein (144aa)
Acetyltransferases n=2 Tax=Clostridiales RepID=D4MVD6_9FIRM
Acetyltransferases
Acetyltransferases {ECO:0000313|EMBL:CBL39352.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_5
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5053..5481
DNA (429bp) protein (143aa)
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4MVD7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV16975.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_007_000M1_scaffold_2193_6
unknown

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5512..6453
DNA (942bp) protein (314aa)
Prolyl oligopeptidase family n=2 Tax=Clostridiales RepID=D4MVD8_9FIRM
Prolyl oligopeptidase family.
Prolyl oligopeptidase family {ECO:0000313|EMBL:CBL39354.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_7
unknown

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comp(6523..7998)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P476_9CLOT
Putative RNA methylase family UPF0020.
Putative RNA methylase family UPF0020 {ECO:0000313|EMBL:CBL39355.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_8
unknown

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8147..8659
DNA (513bp) protein (171aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0P477_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39356.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_9
unknown

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8662..10056
DNA (1395bp) protein (465aa)
Uncharacterized FAD-dependent dehydrogenases n=2 Tax=Clostridiales RepID=D4MVE1_9FIRM
Uncharacterized FAD-dependent dehydrogenases
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CBL39357.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_10
unknown

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comp(10164..10610)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P479_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39358.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_11
unknown

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comp(10570..10794)
DNA (225bp) protein (75aa)
Predicted metal-dependent phosphoesterases (PHP family) n=2 Tax=Clostridiales RepID=D4MVE3_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CBL39359.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2193_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10816..11160)
DNA (345bp) protein (115aa)
MarR family protein n=4 Tax=Clostridiales RepID=R5Z917_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EKY21000.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
MarR family transcriptional regulator
L1_007_000M1_scaffold_2193_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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11395..12756
DNA (1362bp) protein (454aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=5 Tax=Clostridiales RepID=D4MVE4_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_007_000M1_scaffold_2193_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12962..13822)
DNA (861bp) protein (287aa)
Cof-like hydrolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PZ71_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS20712.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_2193_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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13875..14906
DNA (1032bp) protein (344aa)
Hydrolase, NUDIX family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q032_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EKY20997.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Isopentenyldiphosphate isomerase
Displaying 15 items

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