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L1_007_000M1_scaffold_2202

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2202_1
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1167)
-----------------
DNA (1167bp)
protein (389aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5ZDU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32281.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_007_000M1_scaffold_2202_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1275..2081)
-----------------
DNA (807bp)
protein (269aa)
HAD-superfamily hydrolase, subfamily IIB n=4 Tax=Clostridiales RepID=D4MVU3_9FIRM
HAD-superfamily hydrolase, subfamily IIB
Cof-like hydrolase {ECO:0000313|EMBL:EKY22956.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_2202_3
unknown

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comp(2107..3834)
-----------------
DNA (1728bp)
protein (576aa)
exonuclease RecJ (EC:3.1.-.-)
Exonuclease RecJ {ECO:0000313|EMBL:CBL39508.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBL39508.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Exonuclease RecJ n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MVU2_9FIRM
L1_007_000M1_scaffold_2202_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3899..6193)
-----------------
DNA (2295bp)
protein (765aa)
Protein-export membrane protein SecD n=2 Tax=Lachnospiraceae RepID=E5VMP9_9FIRM
protein translocase subunit secF/protein translocase subunit secD
Protein-export membrane protein SecD {ECO:0000313|EMBL:CDA32278.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_007_000M1_scaffold_2202_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6180..7556)
-----------------
DNA (1377bp)
protein (459aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q4Q3_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EKY22953.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L1_007_000M1_scaffold_2202_6
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7852..8217)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=L1Q4Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY22951.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_007_000M1_scaffold_2202_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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8315..9142
-----------------
DNA (828bp)
protein (276aa)
PHP domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5G0_9FIRM
PHP domain protein {ECO:0000313|EMBL:EKY22950.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted metal-dependent phosphoesterases (PHP family)
L1_007_000M1_scaffold_2202_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9223..9516)
-----------------
DNA (294bp)
protein (98aa)
Protein translocase subunit yajC n=5 Tax=Clostridiales RepID=D4MVT6_9FIRM
protein translocase subunit yajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EKY22949.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_2202_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9543..10670)
-----------------
DNA (1128bp)
protein (376aa)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Queuine tRNA-ribosyltransferase n=5 Tax=Clostridiales RepID=D4MVT5_9FIRM
L1_007_000M1_scaffold_2202_10
unknown

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comp(10673..11773)
-----------------
DNA (1101bp)
protein (367aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Chorismate synthase n=2 Tax=Clostridiales RepID=D4MVT4_9FIRM
L1_007_000M1_scaffold_2202_11
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11786..12493)
-----------------
DNA (708bp)
protein (236aa)
Ribosomal protein S1 n=4 Tax=Clostridiales RepID=D4MVT3_9FIRM
S1 RNA binding domain-containing protein {ECO:0000313|EMBL:EFV15907.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Ribosomal protein S1
L1_007_000M1_scaffold_2202_12
unknown

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comp(12552..14657)
-----------------
DNA (2106bp)
protein (702aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NZX3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39498.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_2202_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14654..14833)
-----------------
DNA (180bp)
protein (60aa)
Protein kinase domain n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YXY4_9FIRM
Protein kinase domain.
Protein kinase domain {ECO:0000313|EMBL:CDA32268.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Displaying 13 items

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