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L1_007_000M1_scaffold_2748

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2748_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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167..1015
-----------------
DNA (849bp)
protein (283aa)
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4MUX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV15741.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_007_000M1_scaffold_2748_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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1012..1839
-----------------
DNA (828bp)
protein (276aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=5 Tax=Clostridiales RepID=D4MUX9_9FIRM
L1_007_000M1_scaffold_2748_3
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1918..2760
-----------------
DNA (843bp)
protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VN36_9FIRM
L1_007_000M1_scaffold_2748_4
unknown

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2779..3168
-----------------
DNA (390bp)
protein (130aa)
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Aspartate 1-decarboxylase n=5 Tax=Clostridiales RepID=D4MUY1_9FIRM
L1_007_000M1_scaffold_2748_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3179..4369
-----------------
DNA (1191bp)
protein (397aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EDS20526.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDS20526.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EDS20526.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=4 Tax=Clostridiales RepID=B0P5C3_9CLOT
L1_007_000M1_scaffold_2748_6
unknown

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4452..5939
-----------------
DNA (1488bp)
protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Signal transduction histidine kinase n=2 Tax=Clostridiales RepID=D4MUY3_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_2748_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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5941..6630
-----------------
DNA (690bp)
protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=5 Tax=Clostridiales RepID=D4MUY4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:EKY21380.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_2748_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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6640..7350
-----------------
DNA (711bp)
protein (237aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
RNA pseudouridine synthase n=4 Tax=Clostridiales RepID=B0P5C6_9CLOT
RNA pseudouridine synthase {ECO:0000313|EMBL:EKY21381.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_2748_9
unknown

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7371..8165
-----------------
DNA (795bp)
protein (265aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type {ECO:0000313|EMBL:CBL39202.1}; EC=5.3.1.16 {ECO:0000313|EMBL:CBL39202.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MUY6_9FIRM
L1_007_000M1_scaffold_2748_10
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8195..8689
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P5C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS20531.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L1_007_000M1_scaffold_2748_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8780..9268)
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=L1Q069_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21384.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_007_000M1_scaffold_2748_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9301..10035)
-----------------
DNA (735bp)
protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases n=3 Tax=Clostridiales RepID=D4MUY9_9FIRM
L1_007_000M1_scaffold_2748_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10062..11495)
-----------------
DNA (1434bp)
protein (478aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=2 Tax=Lachnospiraceae RepID=E5VN62_9FIRM
L1_007_000M1_scaffold_2748_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11613..11894)
-----------------
DNA (282bp)
protein (94aa)
Phosphocarrier, HPr family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q194_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EKY21387.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Phosphotransferase System HPr (HPr) Family
L1_007_000M1_scaffold_2748_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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11947..12174
-----------------
DNA (228bp)
protein (76aa)
SpoIID/LytB domain n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZG16_9FIRM
SpoIID/LytB domain {ECO:0000313|EMBL:CDA33111.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
SpoIID/LytB domain
Displaying 15 items

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