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L1_007_000M1_scaffold_5417

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_5417_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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110..340
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P400_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS20629.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L1_007_000M1_scaffold_5417_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(406..1392)
DNA (987bp) protein (329aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P3Z9_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EDS20628.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Predicted Fe-S oxidoreductases
L1_007_000M1_scaffold_5417_3
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(1568..1975)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD70959.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L1_007_000M1_scaffold_5417_4
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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2324..2761
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C1C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD71929.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L1_007_000M1_scaffold_5417_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3321..4526)
DNA (1206bp) protein (402aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=2 Tax=Clostridiales RepID=D4MV70_9FIRM
L1_007_000M1_scaffold_5417_6
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4619..5341)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1N2_9FIRM
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EKY21904.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transcriptional regulator, GntR family
L1_007_000M1_scaffold_5417_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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5465..6211
DNA (747bp) protein (249aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q2I5_9FIRM
L1_007_000M1_scaffold_5417_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6281..6748
DNA (468bp) protein (156aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=2 Tax=Lachnospiraceae RepID=E5VLS4_9FIRM
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:EFV16198.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_007_000M1_scaffold_5417_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6835..8547)
DNA (1713bp) protein (571aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenases, Fe-only n=2 Tax=Clostridiales RepID=D4MV66_9FIRM
Putative ferredoxin hydrogenase {ECO:0000313|EMBL:EKY21907.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_007_000M1_scaffold_5417_10
unknown

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comp(8541..10373)
DNA (1833bp) protein (611aa)
NADPH-dependent glutamate synthase beta chain and related oxidoreductases n=2 Tax=Clostridiales RepID=D4MV65_9FIRM
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
NADPH-dependent glutamate synthase beta chain and related oxidoreductases {ECO:0000313|EMBL:CBL39281.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_007_000M1_scaffold_5417_11
unknown

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comp(10312..10413)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 11 items

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