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L1_007_000M1_scaffold_1292

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1292_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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256..636
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14253.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_1292_2
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

752..898
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=3 Tax=Eubacterium RepID=C0EW90_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:EEG36458.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_007_000M1_scaffold_1292_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1166..2536
DNA (1371bp) protein (457aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAA4_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:CCY14255.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L1_007_000M1_scaffold_1292_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2537..4309
DNA (1773bp) protein (591aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNU8_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CCY14256.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_1292_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4324..5166
DNA (843bp) protein (281aa)
Cof-like hydrolase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNB2_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCY14257.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
HAD-superfamily hydrolase, subfamily IIB
L1_007_000M1_scaffold_1292_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5387..5911
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Adenine phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAS5_9FIRM
adenine phosphoribosyltransferase
L1_007_000M1_scaffold_1292_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6128..6997
DNA (870bp) protein (290aa)
SIS domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GE86_9FIRM
SIS domain protein {ECO:0000313|EMBL:CCY14259.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Transcriptional regulators
L1_007_000M1_scaffold_1292_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6997..8238
DNA (1242bp) protein (414aa)
Flavoprotein family protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAB0_9FIRM
Flavoprotein family protein {ECO:0000313|EMBL:CCY14260.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
conserved hypothetical protein TIGR00275
L1_007_000M1_scaffold_1292_9
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(8393..9493)
DNA (1101bp) protein (367aa)
Site-specific recombinase XerD n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CCL8_9FIRM
Site-specific recombinase XerD {ECO:0000313|EMBL:CDA63027.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_1292_10
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(9681..10172)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F236_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF02785.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
hypothetical protein
L1_007_000M1_scaffold_1292_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10159..10806)
DNA (648bp) protein (216aa)
TM2 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GC51_9FIRM
TM2 domain protein {ECO:0000313|EMBL:EEV00695.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
L1_007_000M1_scaffold_1292_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10882..11358)
DNA (477bp) protein (159aa)
Pathogenicity island protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XD15_9FIRM
Pathogenicity island protein {ECO:0000313|EMBL:EFV20773.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1292_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11397..11705)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WN44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08329.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L1_007_000M1_scaffold_1292_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11874..12092
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WG06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08330.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Putative phage-related DNA binding protein
L1_007_000M1_scaffold_1292_15
unknown

Not on your lists

12106..12267
DNA (162bp) protein (54aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12250..12621)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7APM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44512.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L1_007_000M1_scaffold_1292_17
unknown

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12723..12908
DNA (186bp) protein (62aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_18
unknown

Not on your lists

12980..13288
DNA (309bp) protein (103aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_19
unknown

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13387..13644
DNA (258bp) protein (86aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_20
unknown

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13641..13745
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_21
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14124..14849
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AZJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ34727.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_000M1_scaffold_1292_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14851..15279
DNA (429bp) protein (143aa)
Ribonuclease H (EC:3.1.26.4 4.1.2.4)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G4F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR47605.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L1_007_000M1_scaffold_1292_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

15387..15881
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RRB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35397.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L1_007_000M1_scaffold_1292_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15878..17797
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WIJ6_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY83478.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L1_007_000M1_scaffold_1292_25
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17806..18624
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2BE86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ19767.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_000M1_scaffold_1292_26
unknown

Not on your lists

18563..18886
DNA (324bp) protein (108aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_27
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18998..19351
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GEN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20029.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L1_007_000M1_scaffold_1292_28
unknown

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19320..19574
DNA (255bp) protein (85aa)

This feature has no annotations

L1_007_000M1_scaffold_1292_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19571..19897
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88827.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_000M1_scaffold_1292_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19899..20210
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIS9_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77603.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Displaying items 1-30 of 59 in total

View Taxonomy