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L1_007_000M1_scaffold_1561

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1561_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(712..1284)
DNA (573bp) protein (191aa)
Hydrolase NUDIX family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9N4_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCY12609.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hydrolase NUDIX family
L1_007_000M1_scaffold_1561_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1482..3146)
DNA (1665bp) protein (555aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
araB; ribulokinase (EC:2.7.1.16)
Ribulokinase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G648_9FIRM
L1_007_000M1_scaffold_1561_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3193..4332)
DNA (1140bp) protein (380aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY99_9FIRM
L1_007_000M1_scaffold_1561_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4584..5660
DNA (1077bp) protein (359aa)
HTH-type transcriptional regulator DegA n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJC0_9FIRM
HTH-type transcriptional regulator DegA {ECO:0000313|EMBL:CCY12606.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
transcriptional regulator, LacI family
L1_007_000M1_scaffold_1561_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6350..6847)
DNA (498bp) protein (166aa)
Transcription elongation factor GreA n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G5P3_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
transcription elongation factor GreA
L1_007_000M1_scaffold_1561_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6878..7984)
DNA (1107bp) protein (369aa)
ABC transporter solute-binding protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9N0_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CCY12604.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Spermidine/putrescine-binding periplasmic protein
L1_007_000M1_scaffold_1561_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7981..8781)
DNA (801bp) protein (267aa)
ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G646_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY12603.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Spermidine/putrescine-binding periplasmic protein
L1_007_000M1_scaffold_1561_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8775..9611)
DNA (837bp) protein (279aa)
ABC transporter permease protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GIE3_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY12602.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ABC-type spermidine/putrescine transport system, permease component I
L1_007_000M1_scaffold_1561_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9583..10743)
DNA (1161bp) protein (387aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
Polyamine ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJB6_9FIRM
L1_007_000M1_scaffold_1561_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10716..11252)
DNA (537bp) protein (179aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G5N8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY12600.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_1561_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11988..13223)
DNA (1236bp) protein (412aa)
Serine/threonine transporter SstT n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAU3_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Na+/serine symporter
L1_007_000M1_scaffold_1561_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13249..14043)
DNA (795bp) protein (265aa)
Molybdopterin binding domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GPH5_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:CCY14471.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
competence/damage-inducible protein CinA
L1_007_000M1_scaffold_1561_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14289..15071
DNA (783bp) protein (261aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GP07_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_007_000M1_scaffold_1561_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15691..16434)
DNA (744bp) protein (248aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMS1_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
RNA polymerase, sigma 29 subunit, SigE
L1_007_000M1_scaffold_1561_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16449..17366)
DNA (918bp) protein (306aa)
Putative sigma-E processing peptidase SpoIIGA n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA93_9FIRM
Putative sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:CCY14043.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_1561_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17507..18652)
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GDR5_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cell division protein FtsZ
L1_007_000M1_scaffold_1561_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18955..19728)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14045.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Cell division septal protein
L1_007_000M1_scaffold_1561_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19760..20851)
DNA (1092bp) protein (364aa)
Putative cell division protein FtsW n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GND5_9FIRM
Putative cell division protein FtsW {ECO:0000313|EMBL:CCY14046.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cell division membrane protein
L1_007_000M1_scaffold_1561_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20887..22248)
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMS3_9FIRM
L1_007_000M1_scaffold_1561_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22328..23281)
DNA (954bp) protein (318aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA98_9FIRM
L1_007_000M1_scaffold_1561_21
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23343..25061)
DNA (1719bp) protein (573aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GDR9_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CCY14049.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_1561_22
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25098..27068)
DNA (1971bp) protein (657aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9U0_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CCY14050.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_1561_23
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27084..27617)
DNA (534bp) protein (178aa)
Putative cell division protein FtsL n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GND8_9FIRM
Putative cell division protein FtsL {ECO:0000313|EMBL:CCY14051.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Septum formation initiator.
L1_007_000M1_scaffold_1561_24
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27690..28637)
DNA (948bp) protein (316aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMS6_9FIRM
L1_007_000M1_scaffold_1561_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28789..29526)
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAA3_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY14053.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L1_007_000M1_scaffold_1561_26
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29526..30308)
DNA (783bp) protein (261aa)
ABC-2 type transporter n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GDS1_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L1_007_000M1_scaffold_1561_27
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30383..31270)
DNA (888bp) protein (296aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9U5_9FIRM
L1_007_000M1_scaffold_1561_28
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31483..31596
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14056.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
GntR family transcriptional regulator
Displaying 28 items

View Taxonomy