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L1_007_000M1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_111_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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987..2456
DNA (1470bp) protein (490aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase major domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBE1_9FIRM
Orn/Lys/Arg decarboxylase major domain protein {ECO:0000313|EMBL:CCY13209.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_111_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2453..3082
DNA (630bp) protein (210aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7C8_9FIRM
L1_007_000M1_scaffold_111_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3149..4171
DNA (1023bp) protein (341aa)
Putative DNA polymerase III delta' subunit n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKW8_9FIRM
Putative DNA polymerase III delta' subunit {ECO:0000313|EMBL:CCY13211.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
DNA polymerase III subunit delta'
L1_007_000M1_scaffold_111_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4289..5188
DNA (900bp) protein (300aa)
PSP1 C-terminal domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GK74_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CCY13212.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Uncharacterized homolog of PSP1
L1_007_000M1_scaffold_111_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5212..5961
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13213.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Predicted O-methyltransferase
L1_007_000M1_scaffold_111_6
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5963..6805
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET67_9FIRM
tetrapyrrole (corrin/porphyrin) methylase
L1_007_000M1_scaffold_111_7
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7012..8064
DNA (1053bp) protein (351aa)
Bacterial group 2 Ig-like protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET66_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EEG37567.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Glycoside Hydrolase Family 13 candidate a-glycosidase (amylase-related)
L1_007_000M1_scaffold_111_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8077..10407
DNA (2331bp) protein (777aa)
Bacterial group 2 Ig-like protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJG0_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCY12661.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_111_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10712..11836
DNA (1125bp) protein (375aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
alr1; alanine racemase Alr (EC:5.1.1.1)
Alanine racemase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G5T9_9FIRM
L1_007_000M1_scaffold_111_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11889..12128
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12659.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
putative lipoprotein
L1_007_000M1_scaffold_111_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12259..13344
DNA (1086bp) protein (362aa)
Putative lipoprotein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G691_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CCY12658.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
lipoprotein
L1_007_000M1_scaffold_111_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13519..13701
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GIJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12657.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
putative signaling protein
L1_007_000M1_scaffold_111_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13711..14388
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12656.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
L1_007_000M1_scaffold_111_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14385..14915
DNA (531bp) protein (177aa)
Transporter gate domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G5T5_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:CCY12655.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
nucleoside recognition domain-containing protein
L1_007_000M1_scaffold_111_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15020..15127)
DNA (108bp) protein (36aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5G9S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18002.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_007_000M1_scaffold_111_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15602..16153
DNA (552bp) protein (184aa)
Hydrolase NUDIX family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G685_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCY12653.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ADP-ribose pyrophosphatase
L1_007_000M1_scaffold_111_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16518..17345)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GP89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14552.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_111_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17572..18942
DNA (1371bp) protein (457aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GPT4_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CCY14551.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
peptidoglycan-binding exported protein
L1_007_000M1_scaffold_111_19
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19067..20782)
DNA (1716bp) protein (572aa)
ATPase, AAA family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET37_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EEG37538.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
clpC; ATP-dependent Clp protease
L1_007_000M1_scaffold_111_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21054..22088
DNA (1035bp) protein (345aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA51_9FIRM
L1_007_000M1_scaffold_111_21
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22333..23007
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6J6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY12788.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_111_22
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22979..24193
DNA (1215bp) protein (405aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GIX8_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCY12787.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
N-acetylmuramoyl-L-alanine amidase
L1_007_000M1_scaffold_111_23
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24407..26569
DNA (2163bp) protein (721aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJR1_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCY12786.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_111_24
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26793..27317
DNA (525bp) protein (175aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G652_9FIRM
L1_007_000M1_scaffold_111_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27707..28414)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12784.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_111_26
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28669..30120
DNA (1452bp) protein (484aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Glutamate--tRNA ligase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6J2_9FIRM
hypothetical protein
L1_007_000M1_scaffold_111_27
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30852..31496)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14498.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_111_28
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31970..33640
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Formate--tetrahydrofolate ligase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GP52_9FIRM
formate--tetrahydrofolate ligase
L1_007_000M1_scaffold_111_29
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34129..37131
DNA (3003bp) protein (1001aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GK85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13222.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_111_30
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37889..39211)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G613_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12745.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
Displaying items 1-30 of 97 in total

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