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L1_007_000M1_scaffold_563

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_563_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(515..1186)
DNA (672bp) protein (224aa)
DNA-binding domain-containing protein AraC-type n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G934_9FIRM
DNA-binding domain-containing protein AraC-type {ECO:0000313|EMBL:CCY13658.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1823..3751
DNA (1929bp) protein (643aa)
DNA-binding domain-containing protein AraC-type n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GCM3_9FIRM
DNA-binding domain-containing protein AraC-type {ECO:0000313|EMBL:CCY13659.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_563_3
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4547..5131
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035D2BF1
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02473.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
L1_007_000M1_scaffold_563_4
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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5209..9717
DNA (4509bp) protein (1503aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369E373
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02472.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Beta-mannanase
L1_007_000M1_scaffold_563_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9774..11132
DNA (1359bp) protein (453aa)
Bacterial Ig-like domain (Group 2)./Bacterial Ig-like domain (Group 3) n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLJ3_9FIRM
Bacterial Ig-like domain (Group 2)./Bacterial Ig-like domain (Group 3) {ECO:0000313|EMBL:CCY13662.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11372..13678
DNA (2307bp) protein (769aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G939_9FIRM
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CCY13663.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Bacterial Ig-like domain (group 2).
L1_007_000M1_scaffold_563_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13662..15062
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GCM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13664.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_8
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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15194..16096
DNA (903bp) protein (301aa)
Cobalt ABC transport system permease protein CbiQ4 n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BNP4_9FIRM
Cobalt ABC transport system permease protein CbiQ4 {ECO:0000313|EMBL:CDA64810.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cbiQ4; cobalt ABC transport system permease protein CbiQ4
L1_007_000M1_scaffold_563_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16138..17919
DNA (1782bp) protein (594aa)
Cobalt ABC transport system ATP-binding protein CbiO5 n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLK2_9FIRM
Cobalt ABC transport system ATP-binding protein CbiO5 {ECO:0000313|EMBL:CCY13431.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
ATPase component of various ABC-type transport systems
L1_007_000M1_scaffold_563_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17923..18897
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13432.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19021..20034
DNA (1014bp) protein (338aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8E9_9FIRM
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCY13433.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
xylose isomerase domain-containing protein
L1_007_000M1_scaffold_563_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20192..20833)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GC08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13434.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21571..22980
DNA (1410bp) protein (470aa)
Carboxyl transferase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7Z4_9FIRM
Carboxyl transferase domain protein {ECO:0000313|EMBL:CCY13435.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
carboxyl transferase
L1_007_000M1_scaffold_563_14
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22993..23337
DNA (345bp) protein (115aa)
Sodium pump decarboxylase, gamma subunit n=3 Tax=Eubacterium RepID=C0EYX8_9FIRM
Sodium pump decarboxylase gamma subunit {ECO:0000313|EMBL:CDB19151.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
sodium pump decarboxylase subunit gamma
L1_007_000M1_scaffold_563_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23442..23810
DNA (369bp) protein (123aa)
Biotin-requiring enzyme n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKW9_9FIRM
Biotin-requiring enzyme {ECO:0000313|EMBL:CCY13437.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Acetyl/propionyl-CoA carboxylase, alpha subunit
L1_007_000M1_scaffold_563_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23844..24968
DNA (1125bp) protein (375aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.70 4.1.1.3)
Sodium ion-translocating decarboxylase, beta subunit n=3 Tax=Eubacterium RepID=C0EYX6_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDB19149.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_007_000M1_scaffold_563_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25041..26453
DNA (1413bp) protein (471aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Conserved carboxylase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GC13_9FIRM
Conserved carboxylase domain protein {ECO:0000313|EMBL:CCY13439.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_563_18
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26691..27110)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13440.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27583..31284
DNA (3702bp) protein (1234aa)
Repeat protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLL2_9FIRM
Repeat protein {ECO:0000313|EMBL:CCY13441.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Bacterial surface proteins containing Ig-like domains
L1_007_000M1_scaffold_563_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31658..33148
DNA (1491bp) protein (497aa)
Glycerol kinase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKX5_9FIRM
Glycerol kinase {ECO:0000313|EMBL:CCY13442.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
glycerol kinase
L1_007_000M1_scaffold_563_21
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33168..34877
DNA (1710bp) protein (570aa)
FAD dependent oxidoreductase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8G1_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCY13443.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
FAD dependent oxidoreductase
L1_007_000M1_scaffold_563_22
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34870..36126
DNA (1257bp) protein (419aa)
Putative NAD(FAD)-dependent dehydrogenase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GC19_9FIRM
Putative NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:CCY13444.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
putative NAD(FAD)-dependent dehydrogenase
L1_007_000M1_scaffold_563_23
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36075..36497
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G804_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13445.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_24
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36501..37910
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13446.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37907..39034
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13447.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_563_26
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39407..40174
DNA (768bp) protein (256aa)
Transcriptional repressor n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8G7_9FIRM
Transcriptional repressor {ECO:0000313|EMBL:CCY13448.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
transcriptional regulator, DeoR family
L1_007_000M1_scaffold_563_27
unknown

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comp(40223..40408)
DNA (186bp) protein (62aa)

This feature has no annotations

L1_007_000M1_scaffold_563_28
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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40502..40636
DNA (135bp) protein (45aa)
Excisionase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XNM7_9FIRM
Excisionase {ECO:0000313|EMBL:CDA14159.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
DNA invertase
L1_007_000M1_scaffold_563_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40771..41934
DNA (1164bp) protein (388aa)
IS605 OrfB family transposase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9P9_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EES78192.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transposase
Displaying 29 items

View Taxonomy