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L1_007_000M1_scaffold_839

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_839_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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159..1307
DNA (1149bp) protein (383aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Aminotransferase class V n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G766_9FIRM
Aminotransferase class V {ECO:0000313|EMBL:CCY13130.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_839_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1339..2523
DNA (1185bp) protein (395aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Probable tRNA sulfurtransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKQ8_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L1_007_000M1_scaffold_839_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2606..2842)
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=C0EZE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13132.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_839_4
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3101..4453
DNA (1353bp) protein (451aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
tRNA methylthiotransferase YqeV n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7M0_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:CCY13133.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_839_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4508..4765
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=C0EZE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13134.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_839_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4768..5205
DNA (438bp) protein (146aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Putative Holliday junction resolvase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G770_9FIRM
Holliday junction resolvase YqgF
L1_007_000M1_scaffold_839_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5245..5532
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13136.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_839_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5655..7319
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GK00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13137.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
beta-lactamase domain-containing protein
L1_007_000M1_scaffold_839_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7323..7712
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13138.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Protein of unknown function (DUF964).
L1_007_000M1_scaffold_839_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7821..8186
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13685.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_839_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8183..8833
DNA (651bp) protein (217aa)
O-methyltransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GM95_9FIRM
O-methyltransferase {ECO:0000313|EMBL:CCY13686.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Predicted O-methyltransferase
L1_007_000M1_scaffold_839_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8908..10131
DNA (1224bp) protein (408aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase U32 family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLL7_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CCY13687.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_839_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10190..10819
DNA (630bp) protein (210aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G957_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
RNA polymerase sigma-27/28 subunit,RpsK/SigK
L1_007_000M1_scaffold_839_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10855..11370
DNA (516bp) protein (172aa)
HAD phosphatase family IIIA n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GCQ2_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CCY13689.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_839_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11433..11990
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8Q6_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_007_000M1_scaffold_839_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12232..13386
DNA (1155bp) protein (385aa)
Polysaccharide deacetylase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GM99_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCY13691.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
polysaccharide deacetylase
L1_007_000M1_scaffold_839_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13564..14424
DNA (861bp) protein (287aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLM3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY13692.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Predicted membrane protein
L1_007_000M1_scaffold_839_18
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14738..15121
DNA (384bp) protein (128aa)
Transcriptional regulator BlaI/MecI/CopY family n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G488_9FIRM
Transcriptional regulator BlaI/MecI/CopY family {ECO:0000313|EMBL:CDB19125.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Predicted transcriptional regulator
L1_007_000M1_scaffold_839_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15330..15704
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G960_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13693.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_839_20
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15879..16151
DNA (273bp) protein (91aa)
10 kDa chaperonin n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GCQ5_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Co-chaperonin GroES (HSP10)
L1_007_000M1_scaffold_839_21
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16241..17863
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8R0_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
chaperonin GroL
L1_007_000M1_scaffold_839_22
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18195..19523
DNA (1329bp) protein (443aa)
Uncharacterized protein (Fragment) n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35305.1}; Flags: Fragment;; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Hemolysins and related proteins containing CBS domains
L1_007_000M1_scaffold_839_23
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19477..20814
DNA (1338bp) protein (446aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
Potassium uptake protein TrkH family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMA4_9FIRM
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CCY13696.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L1_007_000M1_scaffold_839_24
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20831..21493
DNA (663bp) protein (221aa)
TrkA N-terminal domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLM7_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:CCY13697.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
TrkA-N domain-containing protein
L1_007_000M1_scaffold_839_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21648..22124
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G962_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13698.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Predicted membrane protein
L1_007_000M1_scaffold_839_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22153..23334
DNA (1182bp) protein (394aa)
Amidohydrolase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZC1_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EEG35355.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
peptidase M20
L1_007_000M1_scaffold_839_27
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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23624..25843
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BMY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64490.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas3; CRISPR-associated helicase Cas3
L1_007_000M1_scaffold_839_28
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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25863..26591
DNA (729bp) protein (243aa)
Crispr-protein cas5 family n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BZ85_9FIRM
Crispr-protein cas5 family {ECO:0000313|EMBL:CDA64491.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas5; CRISPR-associated protein Cas5, Dvulg subtype
L1_007_000M1_scaffold_839_29
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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26585..28414
DNA (1830bp) protein (610aa)
Crispr-protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CGU4_9FIRM
Crispr-protein {ECO:0000313|EMBL:CDA64492.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas_csd1; CRISPR-associated protein, Csd1 family
L1_007_000M1_scaffold_839_30
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

28416..29276
DNA (861bp) protein (287aa)
Crispr-protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJQ6_9FIRM
Crispr-protein {ECO:0000313|EMBL:CDA64493.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas_csd2; CRISPR-associated protein, Csd2 family
Displaying items 1-30 of 69 in total

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