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L1_007_000M1_scaffold_4031

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4031_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(177..1136)
DNA (960bp) protein (320aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T649_9CLOT
L1_007_000M1_scaffold_4031_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1648..1857)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T8Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55376.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
membrane protein
L1_007_000M1_scaffold_4031_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1873..1977)
DNA (105bp) protein (35aa)
Sortase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SNI6_9CLOT
Sortase {ECO:0000313|EMBL:CCZ55375.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
sortase
L1_007_000M1_scaffold_4031_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1974..2213)
DNA (240bp) protein (80aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:75 RepID=R5SWY7_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCZ55374.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
AcrR; transcriptional regulator
L1_007_000M1_scaffold_4031_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2424..3965)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55373.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_4031_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3990..4250)
DNA (261bp) protein (87aa)
Sugar-binding domain protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5TE27_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:CCZ55372.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
putative LacI family transcriptional regulator
L1_007_000M1_scaffold_4031_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4504..4767)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73524.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L1_007_000M1_scaffold_4031_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4866..6296)
DNA (1431bp) protein (477aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEQ7_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ51648.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_4031_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6353..7312)
DNA (960bp) protein (320aa)
Uncharacterized domain HDIG n=1 Tax=Clostridium sp. CAG:75 RepID=R5SL66_9CLOT
Uncharacterized domain HDIG {ECO:0000313|EMBL:CCZ51649.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
uncharacterized domain HDIG
L1_007_000M1_scaffold_4031_10
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7458..8084)
DNA (627bp) protein (209aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:75 RepID=R5SD96_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
FliA/WhiG family RNA polymerase sigma factor
Displaying 10 items

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