ggKbase home page

L1_007_000M1_scaffold_3289

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3289_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

444..1214
DNA (771bp) protein (257aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Clostridium sp. CAG:75 RepID=R5SDA4_9CLOT
Hydrolase TatD family {ECO:0000313|EMBL:CCZ51660.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_3289_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1352..2215
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. CAG:75 RepID=R5SL80_9CLOT
L1_007_000M1_scaffold_3289_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2222..4003
DNA (1782bp) protein (594aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SER4_9CLOT
Creatinase {ECO:0000313|EMBL:CCZ51658.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_3289_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4064..4708)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T8Q0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55371.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
PAP2 superfamily.
L1_007_000M1_scaffold_3289_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4791..5351)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SNI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55370.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_3289_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5382..6548)
DNA (1167bp) protein (389aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:75 RepID=R5SWY3_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ55369.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_3289_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6704..8461
DNA (1758bp) protein (586aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQD4_9CLOT
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCZ55368.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_3289_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8454..10235
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T8P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55366.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_3289_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10432..11475
DNA (1044bp) protein (348aa)
Transposase, IS4 family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTT3_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EEG94038.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying 9 items

View Taxonomy