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L1_007_000M1_scaffold_1383

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1383_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(343..2181)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
glmS; L-glutamine:D-fructose-6-phosphate isomerase (deaminating) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MMH9_9FIRM
L1_007_000M1_scaffold_1383_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2282..3442)
DNA (1161bp) protein (387aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:EDN77846.1}; EC=3.1.4.- {ECO:0000313|EMBL:EDN77846.1};; EC=5.1.3.- {ECO:0000313|EMBL:EDN77846.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2P7_RUMGN
Polysialic acid biosynthesis protein P7
L1_007_000M1_scaffold_1383_3
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3442..4119)
DNA (678bp) protein (226aa)
neuA; N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
Cytidylyltransferase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QM13_9FIRM
Cytidylyltransferase {ECO:0000313|EMBL:CDC37628.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L1_007_000M1_scaffold_1383_4
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4116..4814)
DNA (699bp) protein (233aa)
nnaC; acylneuraminate cytidylyltransferase (EC:2.7.7.43 5.1.3.-)
N-acylneuraminate cytidylyltransferase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R3G5_9FIRM
N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:CDC37631.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L1_007_000M1_scaffold_1383_5
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4818..5858)
DNA (1041bp) protein (347aa)
N-acetylneuraminate synthase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QXF3_9FIRM
N-acetylneuraminate synthase {ECO:0000313|EMBL:CDC37634.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
N-acetylneuraminate synthase
L1_007_000M1_scaffold_1383_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5875..6507)
DNA (633bp) protein (211aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2Q0_RUMGN
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:EDN77849.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
shikimate 5-dehydrogenase
L1_007_000M1_scaffold_1383_7
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6520..7929)
DNA (1410bp) protein (470aa)
Polysaccharide biosynthesis protein n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PPB1_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EGV11097.1}; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 393 str. F0440.;"
polysaccharide biosynthesis protein
L1_007_000M1_scaffold_1383_8
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7930..9189)
DNA (1260bp) protein (420aa)
O-antigen polymerase n=1 Tax=Clostridium sp. CAG:571 RepID=R5XNI6_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:CDA16250.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
L1_007_000M1_scaffold_1383_9
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9191..10300)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B5501D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA70594.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_007_000M1_scaffold_1383_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10317..11012)
DNA (696bp) protein (232aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XE50_9CLOT
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ENZ13520.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sgaE; L-ribulose-5-phosphate 4-epimerase
L1_007_000M1_scaffold_1383_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11026..12078)
DNA (1053bp) protein (351aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KJJ66090.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KJJ66090.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A6E5_9CLOT
dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase
L1_007_000M1_scaffold_1383_12
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12084..12800)
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
ispD; putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. ASF502 RepID=N2A4F1_9CLOT
L1_007_000M1_scaffold_1383_13
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12830..13720)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B75E7E
LPS biosynthesis protein {ECO:0000313|EMBL:ETP71058.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L1_007_000M1_scaffold_1383_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13761..14882)
DNA (1122bp) protein (374aa)
Probable hexosyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN39_CLOPE
hexosyltransferase
Probable hexosyltransferase {ECO:0000313|EMBL:BAB80205.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L1_007_000M1_scaffold_1383_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14940..15683)
DNA (744bp) protein (248aa)
WecB/TagA/CpsF family glycosyl transferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSB0_9FIRM
WecB/TagA/CpsF family glycosyl transferase {ECO:0000313|EMBL:EHL71913.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
N-acetyl-mannosamine transferase
L1_007_000M1_scaffold_1383_16
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15698..16609)
DNA (912bp) protein (304aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIM5_CELLD
Uncharacterized protein {ECO:0000313|EMBL:EWM54097.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
L1_007_000M1_scaffold_1383_17
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16606..17640)
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSB4_9FIRM
L1_007_000M1_scaffold_1383_18
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17656..18585)
DNA (930bp) protein (310aa)
mannose-6-phosphate isomerase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37A2C
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EWM54098.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
mannose-1-phosphate guanylyltransferase
L1_007_000M1_scaffold_1383_19
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18582..19658)
DNA (1077bp) protein (359aa)
manC; mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
mannose-1-phosphate guanylyltransferase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37A2B
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EWM54099.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
L1_007_000M1_scaffold_1383_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19686..21344)
DNA (1659bp) protein (553aa)
Phosphomannomutase (EC:5.4.2.8)
Putative phosphoglucomutase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAF1_9CLOT
Putative phosphoglucomutase {ECO:0000313|EMBL:ERI69165.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_007_000M1_scaffold_1383_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22516..22824)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96566.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Displaying 21 items

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