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L1_007_000M1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_223_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(312..2594)
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52015.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2755..3261
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SMB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52014.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Predicted membrane protein
L1_007_000M1_scaffold_223_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3447..5093)
DNA (1647bp) protein (549aa)
putative glycoside hydrolase (EC:3.2.1.-)
Glycosyl hydrolase family 43 n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFZ5_9CLOT
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CCZ52013.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_223_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5180..6520)
DNA (1341bp) protein (447aa)
Glycosyl hydrolase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T4L8_9CLOT
Glycosyl hydrolase {ECO:0000313|EMBL:CCZ52012.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
O-glycosyl hydrolase
L1_007_000M1_scaffold_223_5
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6517..8568)
DNA (2052bp) protein (684aa)
Beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DNE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA86434.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
L1_007_000M1_scaffold_223_6
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8695..10092)
DNA (1398bp) protein (466aa)
Transporter major facilitator family protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DQ13_9CLOT
Transporter major facilitator family protein {ECO:0000313|EMBL:CDA86436.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
xylose transporter
L1_007_000M1_scaffold_223_7
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10117..11286)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DDB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA86438.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
beta-glucosidase
L1_007_000M1_scaffold_223_8
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11462..12661
DNA (1200bp) protein (400aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:230 RepID=R6DNF0_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA86439.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
AraC-type DNA-binding protein, response regulator
L1_007_000M1_scaffold_223_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12643..14472)
DNA (1830bp) protein (610aa)
ABC-type multidrug transport system, ATPase and permease components (EC:3.6.3.-)
ABC-type multidrug transport system ATPase and permease component n=1 Tax=Clostridium sp. CAG:277 RepID=R7JYJ1_9CLOT
ABC-type multidrug transport system ATPase and permease component {ECO:0000313|EMBL:CDE69024.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L1_007_000M1_scaffold_223_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14501..15085)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JYJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69029.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
L1_007_000M1_scaffold_223_11
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15063..15182)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SNQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54783.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_223_12
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15271..18525)
DNA (3255bp) protein (1085aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SVB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54784.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_13
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18584..18700)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SNQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54783.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_223_14
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18786..21854)
DNA (3069bp) protein (1023aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M4W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB81132.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L1_007_000M1_scaffold_223_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21879..22136)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VS82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94961.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L1_007_000M1_scaffold_223_16
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22218..22868)
DNA (651bp) protein (217aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:75 RepID=R5TB34_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ54317.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
TetR family transcriptional regulator
L1_007_000M1_scaffold_223_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22995..24239)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SMF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54318.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_18
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24300..25196)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SU36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54319.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_19
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25503..25982
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:75 RepID=R5SKI0_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
greA_B1; transcription elongation factor GreA/GreB1
L1_007_000M1_scaffold_223_20
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26108..27604
DNA (1497bp) protein (499aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T5R5_9CLOT
L1_007_000M1_scaffold_223_21
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27711..29594)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5TB37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54322.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_22
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29594..30148)
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SMG2_9CLOT
LemA family protein {ECO:0000313|EMBL:CCZ54323.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_23
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30160..31716)
DNA (1557bp) protein (519aa)
sialate O-acetylesterase (EC:3.1.1.53)
Sialate O-acetylesterase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SU41_9CLOT
Sialate O-acetylesterase {ECO:0000313|EMBL:CCZ54324.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_223_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31774..32823)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SKI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54325.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_223_25
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32925..33740)
DNA (816bp) protein (272aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T5S0_9CLOT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CCZ54326.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_223_26
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33773..34690)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5TB41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ54327.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L1_007_000M1_scaffold_223_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34735..37299)
DNA (2565bp) protein (855aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
Homocysteine S-methyltransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RNG3_9CLOT
Homocysteine S-methyltransferase {ECO:0000313|EMBL:CCZ42800.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L1_007_000M1_scaffold_223_28
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37482..39488
DNA (2007bp) protein (669aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Clostridium sp. CAG:75 RepID=R5SLC8_9CLOT
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CCZ54595.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_000M1_scaffold_223_29
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39616..40893)
DNA (1278bp) protein (426aa)
Cytosine deaminase and related metal-dependent hydrolases n=1 Tax=Clostridium sp. CAG:75 RepID=R5T6L1_9CLOT
Cytosine deaminase and related metal-dependent hydrolases {ECO:0000313|EMBL:CCZ54596.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Cytosine deaminase and related metal-dependent hydrolases
L1_007_000M1_scaffold_223_30
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40913..41758)
DNA (846bp) protein (282aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium sp. CAG:75 RepID=R5TBW1_9CLOT
inosine guanosine and xanthosine phosphorylase family protein
Displaying items 1-30 of 88 in total

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