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L1_007_000M1_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_310_1
unknown

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)

This feature has no annotations

L1_007_000M1_scaffold_310_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(259..417)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T717_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52912.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(466..1029)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SII6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52913.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Putative agrB-like protein
L1_007_000M1_scaffold_310_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1331..1759
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQ08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52914.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1826..1969
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52915.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2157..2588)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T1Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52916.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_310_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2615..3931)
DNA (1317bp) protein (439aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T725_9CLOT
hypothetical protein
L1_007_000M1_scaffold_310_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4028..4597)
DNA (570bp) protein (190aa)
iorB; indolepyruvate ferredoxin oxidoreductase beta subunit IorB (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase IorB subunit n=1 Tax=Clostridium sp. CAG:75 RepID=R5SIJ0_9CLOT
Indolepyruvate ferredoxin oxidoreductase IorB subunit {ECO:0000313|EMBL:CCZ52918.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4610..6337)
DNA (1728bp) protein (576aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
iorA; indolepyruvate ferredoxin oxidoreductase alpha subunit IorA (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQ14_9CLOT
L1_007_000M1_scaffold_310_10
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6528..7997)
DNA (1470bp) protein (490aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Xylan 1 4-beta-xylosidase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGJ3_9CLOT
Xylan 1 4-beta-xylosidase {ECO:0000313|EMBL:CCZ52920.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_11
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8500..9387
DNA (888bp) protein (296aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:75 RepID=R5T1Z9_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ52921.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_310_12
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9488..10618)
DNA (1131bp) protein (377aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T730_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CCZ52922.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_13
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10955..12802)
DNA (1848bp) protein (616aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
UvrD/REP helicase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQ18_9CLOT
UvrD/REP helicase
L1_007_000M1_scaffold_310_14
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12868..14343)
DNA (1476bp) protein (492aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:230 RepID=R6EDH0_9CLOT
L1_007_000M1_scaffold_310_15
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14312..15133)
DNA (822bp) protein (274aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent deacetylase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T744_9CLOT
NAD-dependent deacetylase {ECO:0000313|EMBL:CCZ52937.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_16
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15212..15823)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69249.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L1_007_000M1_scaffold_310_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15881..17071)
DNA (1191bp) protein (397aa)
Putative reductase BN771_01480 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
putative reductase Ccel_2273 (EC:1.3.1.-)
Putative reductase BN771_01480 n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGL9_9CLOT
L1_007_000M1_scaffold_310_18
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17360..17923
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T224_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52941.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
restriction endonuclease
L1_007_000M1_scaffold_310_19
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17946..20510
DNA (2565bp) protein (855aa)
DEAD_2 domain protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T750_9CLOT
DEAD_2 domain protein {ECO:0000313|EMBL:CCZ52942.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
DEAD/DEAH box helicase
L1_007_000M1_scaffold_310_20
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20733..21977)
DNA (1245bp) protein (415aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium sp. CAG:75 RepID=R5SIM3_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_310_21
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22298..23920)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQ43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52944.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_310_22
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24265..24807)
DNA (543bp) protein (181aa)
50S ribosomal protein L17 n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGM4_9CLOT
50S ribosomal protein L17 {ECO:0000313|EMBL:CCZ52945.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
LSU ribosomal protein L17P
L1_007_000M1_scaffold_310_23
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24824..25783)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium sp. CAG:75 RepID=R5T229_9CLOT
DNA-directed RNA polymerase subunit alpha
L1_007_000M1_scaffold_310_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25832..26425)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Clostridium sp. CAG:75 RepID=R5T755_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
30S ribosomal protein S4
L1_007_000M1_scaffold_310_25
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26482..26880)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Clostridium sp. CAG:75 RepID=R5SIN1_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
30S ribosomal protein S11
L1_007_000M1_scaffold_310_26
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26923..27291)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQ48_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
30S ribosomal protein S13
L1_007_000M1_scaffold_310_27
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28058..28276)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=6 Tax=Clostridiales RepID=R5RWK0_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
translation initiation factor IF-1
L1_007_000M1_scaffold_310_28
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28395..29159)
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T236_9CLOT
methionine aminopeptidase
L1_007_000M1_scaffold_310_29
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29191..29832)
DNA (642bp) protein (214aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Adenylate kinase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T761_9CLOT
hypothetical protein
L1_007_000M1_scaffold_310_30
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30127..31299)
DNA (1173bp) protein (391aa)
Protein translocase subunit SecY n=1 Tax=Clostridium sp. CAG:75 RepID=R5SIN8_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
preprotein translocase subunit SecY
Displaying items 1-30 of 96 in total

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