ggKbase home page

L1_007_000M1_scaffold_551

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_551_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

285..1121
DNA (837bp) protein (279aa)
DegV family protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SF07_9CLOT
DegV family protein {ECO:0000313|EMBL:CCZ52330.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
DegV family protein
L1_007_000M1_scaffold_551_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1075..1356)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SN63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52329.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1329..2522)
DNA (1194bp) protein (398aa)
Fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGT7_9CLOT
Fibronectin type III domain protein {ECO:0000313|EMBL:CCZ52328.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Transglutaminase-like superfamily.
L1_007_000M1_scaffold_551_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2522..3841)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T5E4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52327.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3881..5647)
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T0A7_9CLOT
L1_007_000M1_scaffold_551_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5672..6985)
DNA (1314bp) protein (438aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SF03_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase
L1_007_000M1_scaffold_551_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7205..8914)
DNA (1710bp) protein (570aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Clostridium sp. CAG:75 RepID=R5SN57_9CLOT
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ52324.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_551_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8993..10504)
DNA (1512bp) protein (504aa)
Beta-xylosidase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGT2_9CLOT
Beta-xylosidase {ECO:0000313|EMBL:CCZ52323.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Beta-xylosidase
L1_007_000M1_scaffold_551_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10494..10670)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T5D9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52322.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_551_10
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10752..11696)
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T0A3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52321.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_551_11
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11716..12543)
DNA (828bp) protein (276aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEZ9_9CLOT
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CCZ52320.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_551_12
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12582..13241)
DNA (660bp) protein (220aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Probable transaldolase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SN53_9CLOT
transaldolase
L1_007_000M1_scaffold_551_13
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13419..15173)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6EA46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA87067.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Arylsulfotransferase (ASST).
L1_007_000M1_scaffold_551_14
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15245..15682)
DNA (438bp) protein (146aa)
Thioesterase superfamily protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZ41_9CLOT
Thioesterase superfamily protein {ECO:0000313|EMBL:CCZ51926.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
conserved hypothetical protein TIGR00051
L1_007_000M1_scaffold_551_15
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15933..17768
DNA (1836bp) protein (612aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Clostridium sp. CAG:75 RepID=R5SM07_9CLOT
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CCZ51924.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ABC transporter
L1_007_000M1_scaffold_551_16
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17940..18140)
DNA (201bp) protein (67aa)
Cold shock-like protein cspC n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFI9_9CLOT
Cold shock-like protein cspC {ECO:0000313|EMBL:CCZ51923.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
cold-shock DNA-binding domain-containing protein
L1_007_000M1_scaffold_551_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18291..19748)
DNA (1458bp) protein (486aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T492_9CLOT
Alpha-L-fucosidase {ECO:0000313|EMBL:CCZ51922.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_551_18
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19797..20021)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZ37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ51921.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_19
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20034..21272)
DNA (1239bp) protein (413aa)
Collagenase and related proteases (EC:3.4.-.-)
Collagenase and related proteases n=1 Tax=Clostridium sp. CAG:75 RepID=R5SDY7_9CLOT
Collagenase and related proteases {ECO:0000313|EMBL:CCZ51920.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_551_20
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21352..22020)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SM01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ51919.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_21
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22034..22429)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ51918.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_22
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22432..22773)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T486_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ51917.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_551_23
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22778..24580)
DNA (1803bp) protein (601aa)
Beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZ33_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CCZ51916.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
beta-lactamase domain-containing protein
L1_007_000M1_scaffold_551_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24677..24943)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SDY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ51915.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_25
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24996..25421)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SLZ6_9CLOT
hypothetical protein
L1_007_000M1_scaffold_551_26
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25477..25737)
DNA (261bp) protein (87aa)
UPF0297 protein BN771_00638 n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFI0_9CLOT
UPF0297 protein BN771_00638 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_551_27
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25830..27266)
DNA (1437bp) protein (479aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDN5_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CDC96413.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L1_007_000M1_scaffold_551_28
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27397..27627
DNA (231bp) protein (77aa)
PTS HPr component phosphorylation site n=1 Tax=Clostridium sp. CAG:75 RepID=R5SIH7_9CLOT
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CCZ53605.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
PTS HPr component phosphorylation site.
L1_007_000M1_scaffold_551_29
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27756..28940)
DNA (1185bp) protein (395aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T3S7_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L1_007_000M1_scaffold_551_30
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28951..30114)
DNA (1164bp) protein (388aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T969_9CLOT
Cysteine desulfurase {ECO:0000313|EMBL:CCZ53607.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Displaying items 1-30 of 42 in total

View Taxonomy