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L1_007_000M1_scaffold_866

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_866_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(545..1606)
DNA (1062bp) protein (354aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEL4_9CLOT
L1_007_000M1_scaffold_866_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1687..3126)
DNA (1440bp) protein (480aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Putative pyridoxal phosphate-dependent transferase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZV1_9CLOT
Putative pyridoxal phosphate-dependent transferase {ECO:0000313|EMBL:CCZ52156.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3268..4137)
DNA (870bp) protein (290aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGC5_9CLOT
L1_007_000M1_scaffold_866_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4162..4872)
DNA (711bp) protein (237aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SMN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52159.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_5
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4945..5970)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NIB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10945.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_007_000M1_scaffold_866_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5951..6718)
DNA (768bp) protein (256aa)
Protein of phosphatidic acid phosphatase family YNBD n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZV5_9CLOT
Protein of phosphatidic acid phosphatase family YNBD {ECO:0000313|EMBL:CCZ52161.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
PAP2 superfamily.
L1_007_000M1_scaffold_866_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6864..7169)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T4X5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52162.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_866_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7166..8497)
DNA (1332bp) protein (444aa)
ATPase related to the helicase subunit of the Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGC9_9CLOT
ATPase related to the helicase subunit of the Holliday junction resolvase {ECO:0000313|EMBL:CCZ52163.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L1_007_000M1_scaffold_866_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8600..9268)
DNA (669bp) protein (223aa)
YigZ family protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDI0_9FIRM
YigZ family protein {ECO:0000313|EMBL:CDC96363.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
conserved hypothetical protein TIGR00257
L1_007_000M1_scaffold_866_10
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9305..10339)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52165.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_866_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10381..11646)
DNA (1266bp) protein (422aa)
Iron-only hydrogenase maturation protein HydF n=1 Tax=Clostridium sp. CAG:277 RepID=R7JXY6_9CLOT
Iron-only hydrogenase maturation protein HydF {ECO:0000313|EMBL:CDE68526.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L1_007_000M1_scaffold_866_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11678..12925)
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
proA; Gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0D6_9CLOT
L1_007_000M1_scaffold_866_13
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13001..13864)
DNA (864bp) protein (288aa)
DegV family protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SP06_9CLOT
DegV family protein {ECO:0000313|EMBL:CCZ55505.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
degV family protein
L1_007_000M1_scaffold_866_14
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13966..14853)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T9B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55506.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_866_15
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14874..17426)
DNA (2553bp) protein (851aa)
Membrane carboxypeptidase/penicillin-binding protein (EC:2.4.1.- 3.4.-.-)
Transglycosylase n=1 Tax=Clostridium sp. CAG:75 RepID=R5TEK9_9CLOT
Transglycosylase {ECO:0000313|EMBL:CCZ55507.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_16
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17512..18798)
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQZ5_9CLOT
L1_007_000M1_scaffold_866_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18825..20279)
DNA (1455bp) protein (485aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SXC7_9CLOT
L1_007_000M1_scaffold_866_18
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20309..21787)
DNA (1479bp) protein (493aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Amidophosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SP09_9CLOT
amidophosphoribosyltransferase
L1_007_000M1_scaffold_866_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21880..23283)
DNA (1404bp) protein (468aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1P1_9CLOT
glycoside hydrolase
L1_007_000M1_scaffold_866_20
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23880..24074)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T9C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55511.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_21
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24219..25328)
DNA (1110bp) protein (370aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VTT5_9FIRM
L1_007_000M1_scaffold_866_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25384..26559)
DNA (1176bp) protein (392aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZW0_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:CDE69186.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L1_007_000M1_scaffold_866_23
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26597..27310)
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SPA5_9CLOT
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CCZ52689.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
IMP cyclohydrolase-like protein.
L1_007_000M1_scaffold_866_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27534..28067
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SG01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52690.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_25
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28033..28320
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T1E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52691.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_26
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28389..29327
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T6E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52692.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_866_27
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29333..30010)
DNA (678bp) protein (226aa)
Haloacid dehalogenase/epoxide hydrolase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SHX8_9CLOT
Haloacid dehalogenase/epoxide hydrolase {ECO:0000313|EMBL:CCZ52693.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
putative phosphatase/phosphohexomutase
L1_007_000M1_scaffold_866_28
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30024..30905)
DNA (882bp) protein (294aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:75 RepID=R5SPA9_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ52694.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_866_29
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30970..31296)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T1F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52696.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Small, acid-soluble spore proteins, alpha/beta type.
Displaying 29 items

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