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L1_007_000M1_scaffold_969

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_969_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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171..1169
DNA (999bp) protein (333aa)
Stage III sporulation protein AA n=1 Tax=Clostridium sp. CAG:75 RepID=R5SR54_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:CCZ55593.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
stage III sporulation protein AA
L1_007_000M1_scaffold_969_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1194..1718
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5TET5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55592.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
stage III sporulation protein SpoAB
L1_007_000M1_scaffold_969_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1743..1937
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Clostridium sp. CAG:75 RepID=R5T9I8_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:CCZ55591.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
stage III sporulation protein AC
L1_007_000M1_scaffold_969_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1973..2428
DNA (456bp) protein (152aa)
Stage III sporulation protein AD n=1 Tax=Clostridium sp. CAG:75 RepID=R5SP78_9CLOT
Stage III sporulation protein AD {ECO:0000313|EMBL:CCZ55590.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
stage III sporulation protein AD
L1_007_000M1_scaffold_969_5
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2441..3496
DNA (1056bp) protein (352aa)
Putative stage III sporulation protein AE n=1 Tax=Clostridium sp. CAG:230 RepID=R6DW40_9CLOT
Putative stage III sporulation protein AE {ECO:0000313|EMBL:CDA88476.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
sporulation stage III, protein AE
L1_007_000M1_scaffold_969_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3597..4097
DNA (501bp) protein (167aa)
Stage III sporulation protein AF (Spore_III_AF) n=1 Tax=Clostridium sp. CAG:75 RepID=R5SXI4_9CLOT
Stage III sporulation protein AF (Spore_III_AF) {ECO:0000313|EMBL:CCZ55589.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Stage III sporulation protein AF (Spore_III_AF).
L1_007_000M1_scaffold_969_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4088..4693
DNA (606bp) protein (202aa)
Putative stage III sporulation protein AG n=1 Tax=Clostridium sp. CAG:75 RepID=R5SR51_9CLOT
Putative stage III sporulation protein AG {ECO:0000313|EMBL:CCZ55588.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_969_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4755..5483
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5TET2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55587.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_969_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5607..5966
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T9I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55586.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_969_10
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5984..6424
DNA (441bp) protein (147aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:75 RepID=R5SP76_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
transcription antitermination factor NusB
L1_007_000M1_scaffold_969_11
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6408..7631
DNA (1224bp) protein (408aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEG8_9FIRM
L1_007_000M1_scaffold_969_12
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7647..7847
DNA (201bp) protein (67aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium sp. CAG:75 RepID=R5SR46_9CLOT
L1_007_000M1_scaffold_969_13
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7844..8752
DNA (909bp) protein (303aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5TES9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ55582.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_969_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8837..10711
DNA (1875bp) protein (625aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2M3_9CLOT
deoxyxylulose-5-phosphate synthase
L1_007_000M1_scaffold_969_15
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10708..11589
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RU93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42139.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hemolysin A
L1_007_000M1_scaffold_969_16
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11561..12427
DNA (867bp) protein (289aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFD1_9CLOT
L1_007_000M1_scaffold_969_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12464..12925
DNA (462bp) protein (154aa)
Arginine repressor n=1 Tax=Clostridium sp. CAG:75 RepID=R5T0P2_9CLOT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
arginine repressor
L1_007_000M1_scaffold_969_18
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13051..13779
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein BN771_01150 n=1 Tax=Clostridium sp. CAG:75 RepID=R5T5R7_9CLOT
Probable transcriptional regulatory protein BN771_01150 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_969_19
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13852..18093
DNA (4242bp) protein (1414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SH87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52448.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Ig domain-containing protein
L1_007_000M1_scaffold_969_20
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18188..19885
DNA (1698bp) protein (566aa)
DNA repair protein RecN n=1 Tax=Roseburia sp. CAG:380 RepID=R6VTL0_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
DNA repair protein RecN
L1_007_000M1_scaffold_969_21
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19875..21158)
DNA (1284bp) protein (428aa)
Stage IV sporulation protein B n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEF6_9FIRM
Stage IV sporulation protein B {ECO:0000313|EMBL:CDC95480.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
stage IV sporulation protein B
L1_007_000M1_scaffold_969_22
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21395..22186
DNA (792bp) protein (264aa)
Sporulation transcriptional activator Spo0A n=1 Tax=Clostridium sp. CAG:75 RepID=R5T8K0_9CLOT
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
sporulation transcriptional activator Spo0A
L1_007_000M1_scaffold_969_23
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22348..23784
DNA (1437bp) protein (479aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Glycogen synthase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T388_9CLOT
starch synthase
L1_007_000M1_scaffold_969_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23913..24629
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SHW9_9CLOT
L1_007_000M1_scaffold_969_25
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25175..25948
DNA (774bp) protein (258aa)
Oxidoreductase short chain dehydrogenase/reductase family n=1 Tax=Clostridium sp. CAG:590 RepID=R5EB39_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family {ECO:0000313|EMBL:CCX85366.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
short-chain dehydrogenase/reductase SDR
L1_007_000M1_scaffold_969_26
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25996..26712
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SJR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ53368.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_969_27
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26837..28189)
DNA (1353bp) protein (451aa)
glutamate dehydrogenase (NADP) (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Clostridium sp. CAG:122 RepID=R5S586_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Displaying 27 items

View Taxonomy