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L1_007_000M1_scaffold_2712

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2712_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(94..3612)
DNA (3519bp) protein (1173aa)
HD domain protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T2P1_9CLOT
HD domain protein {ECO:0000313|EMBL:CCZ53176.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
uncharacterized domain HDIG
L1_007_000M1_scaffold_2712_2
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3821..4942)
DNA (1122bp) protein (374aa)
Two-component system response regulator n=1 Tax=Clostridium sp. CAG:230 RepID=R6DKW7_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:CDA85524.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_2712_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4979..7591)
DNA (2613bp) protein (871aa)
Small GTP-binding protein domain n=1 Tax=Clostridium sp. CAG:75 RepID=R5SQP7_9CLOT
Small GTP-binding protein domain {ECO:0000313|EMBL:CCZ53164.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
small GTP-binding protein domain
L1_007_000M1_scaffold_2712_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7605..8582)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SJA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ53163.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_000M1_scaffold_2712_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8694..9890)
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T7S9_9CLOT
L1_007_000M1_scaffold_2712_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10360..10776)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T2M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ53161.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Predicted membrane protein
L1_007_000M1_scaffold_2712_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10935..12134
DNA (1200bp) protein (400aa)
Beta-lactamase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SH76_9CLOT
Beta-lactamase {ECO:0000313|EMBL:CCZ53160.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Beta-lactamase class C and other penicillin binding proteins
L1_007_000M1_scaffold_2712_8
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12490..13275
DNA (786bp) protein (262aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
NAD-dependent protein deacetylase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RY92_9CLOT
silent information regulator protein Sir2
L1_007_000M1_scaffold_2712_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13475..13729
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52130.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_2712_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13797..16082)
DNA (2286bp) protein (762aa)
Alpha-galactosidase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZDY7_EUBR3
Alpha-galactosidase {ECO:0000313|EMBL:ACR77113.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
alpha-galactosidase
L1_007_000M1_scaffold_2712_11
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16079..16669)
DNA (591bp) protein (197aa)
Putative HD superfamily hydrolase n=1 Tax=Clostridium sp. CAG:75 RepID=R5T4U7_9CLOT
Putative HD superfamily hydrolase {ECO:0000313|EMBL:CCZ52127.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Predicted hydrolases of HD superfamily
L1_007_000M1_scaffold_2712_12
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16783..17271)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52126.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_2712_13
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17294..18112)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52125.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_2712_14
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18293..18646)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V1K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92028.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L1_007_000M1_scaffold_2712_15
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19307..21436)
DNA (2130bp) protein (710aa)
cellulase (EC:3.2.1.4)
Cellulase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SR42_9CLOT
Cellulase {ECO:0000313|EMBL:CCZ55578.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_2712_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21848..23038)
DNA (1191bp) protein (397aa)
Transporter major facilitator family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9M7_9FIRM
Transporter major facilitator family {ECO:0000313|EMBL:CCY98514.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Major Facilitator Superfamily.
L1_007_000M1_scaffold_2712_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23054..24922)
DNA (1869bp) protein (623aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:75 RepID=R5T9H7_9CLOT
ABC transporter related {ECO:0000313|EMBL:CCZ55576.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ABC transporter
L1_007_000M1_scaffold_2712_18
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24915..26786)
DNA (1872bp) protein (624aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:75 RepID=R5SP69_9CLOT
ABC transporter related {ECO:0000313|EMBL:CCZ55575.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ABC transporter
L1_007_000M1_scaffold_2712_19
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26861..27826)
DNA (966bp) protein (322aa)
scrK; 6-phosphofructokinase (ATP) (EC:2.7.1.4)
Kinase PfkB family n=1 Tax=Clostridium sp. CAG:75 RepID=R5SXH3_9CLOT
Kinase PfkB family {ECO:0000313|EMBL:CCZ55574.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L1_007_000M1_scaffold_2712_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28278..28952)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UML1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79335.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Abortive infection bacteriophage resistance protein
Displaying 20 items

View Taxonomy