ggKbase home page

L1_007_000M1_scaffold_2986

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2986_1
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

449..1348
DNA (900bp) protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SMQ9_9CLOT
L1_007_000M1_scaffold_2986_2
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1552..2559
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52180.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_2986_3
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2758..3984)
DNA (1227bp) protein (409aa)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZY2_9CLOT
UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000313|EMBL:CCZ52181.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
UDP-N-acetylglucosamine pyrophosphorylase
L1_007_000M1_scaffold_2986_4
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4253..4945
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T4Z4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52182.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_2986_5
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4938..5312
DNA (375bp) protein (125aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGE8_9CLOT
holo-acyl-carrier-protein synthase
L1_007_000M1_scaffold_2986_6
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5359..6948
DNA (1590bp) protein (530aa)
YjeF C-terminal region hydroxyethylthiazole kinase-related/yjeF N-terminal region n=1 Tax=Clostridium sp. CAG:75 RepID=R5SMR3_9CLOT
YjeF C-terminal region hydroxyethylthiazole kinase-related/yjeF N-terminal region {ECO:0000313|EMBL:CCZ52184.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L1_007_000M1_scaffold_2986_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6945..8111
DNA (1167bp) protein (389aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEP4_9CLOT
L1_007_000M1_scaffold_2986_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8249..8608
DNA (360bp) protein (120aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
mRNA interferase n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZZ4_9CLOT
transcriptional modulator of MazE/toxin MazF
L1_007_000M1_scaffold_2986_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8605..9084
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:75 RepID=R5T500_9CLOT
conserved hypothetical protein TIGR00246
L1_007_000M1_scaffold_2986_10
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9126..9653
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52188.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_007_000M1_scaffold_2986_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10061..10240
DNA (180bp) protein (60aa)
Uncharacterized protein n=6 Tax=root RepID=A5Z9Z5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09831.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_007_000M1_scaffold_2986_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10299..10466
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5FBX9_9CLOT
plasmid segregation actin-type ATPase ParM
Uncharacterized protein {ECO:0000313|EMBL:EEA83523.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L1_007_000M1_scaffold_2986_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10698..11219
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13836.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
plasmid segregation actin-type ATPase ParM
L1_007_000M1_scaffold_2986_14
unknown

Not on your lists

11231..11290
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 14 items

View Taxonomy