ggKbase home page

L1_007_000M1_scaffold_4825

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4825_1
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(210..761)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P0K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12016.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_007_000M1_scaffold_4825_2
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(864..2612)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZFW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ14761.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L1_007_000M1_scaffold_4825_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2667..3509)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7M0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61079.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L1_007_000M1_scaffold_4825_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3595..4536)
DNA (942bp) protein (314aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Tagatose-6-phosphate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W469_9CLOT
1-phosphofructokinase
L1_007_000M1_scaffold_4825_5
unknown

Not on your lists

comp(4712..4927)
DNA (216bp) protein (72aa)

This feature has no annotations

L1_007_000M1_scaffold_4825_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4941..5423)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3T3_9CLOT
hypothetical protein
L1_007_000M1_scaffold_4825_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5405..6214)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8L8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39482.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative metal dependent hydrolase
L1_007_000M1_scaffold_4825_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6237..6680)
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium botulinum RepID=B1IG42_CLOBK
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACA45099.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
L1_007_000M1_scaffold_4825_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6775..7005)
DNA (231bp) protein (77aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4P1_9CLOT
Displaying 9 items

View Taxonomy