ggKbase home page

L1_007_000M1_scaffold_3593

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3593_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium sp. CAG:352 RepID=R6QTU3_9CLOT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
riboflavin biosynthesis protein ribBA
L1_007_000M1_scaffold_3593_2
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

347..808
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Clostridium sp. CAG:253 RepID=R6M2J4_9CLOT
L1_007_000M1_scaffold_3593_3
unknown

Not on your lists

comp(866..997)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_007_000M1_scaffold_3593_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1079..1504)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32553.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
engC2; GTPase EngC2
L1_007_000M1_scaffold_3593_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1631..2782)
DNA (1152bp) protein (384aa)
Chaperone protein DnaJ n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0Y7_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
dnaJ; Chaperone protein DnaJ
L1_007_000M1_scaffold_3593_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2950..3588)
DNA (639bp) protein (213aa)
Chaperone protein DnaK n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0J6_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
dnaK; chaperone protein DnaK
L1_007_000M1_scaffold_3593_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3575..4699)
DNA (1125bp) protein (375aa)
Chaperone protein DnaK n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0J6_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
chaperone protein DnaK
L1_007_000M1_scaffold_3593_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4890..5417)
DNA (528bp) protein (176aa)
Protein GrpE n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5E1_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
grpE; protein GrpE
L1_007_000M1_scaffold_3593_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5446..6492)
DNA (1047bp) protein (349aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1E6_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hrcA; heat-inducible transcription repressor HrcA
L1_007_000M1_scaffold_3593_10
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6798..7817
DNA (1020bp) protein (340aa)
Inositol 2-dehydrogenase (EC:1.1.1.18)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Oribacterium sinus F0268 RepID=C2L150_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEJ50278.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
L1_007_000M1_scaffold_3593_11
unknown

Not on your lists

7916..8503
DNA (588bp) protein (196aa)

This feature has no annotations

L1_007_000M1_scaffold_3593_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8560..9567)
DNA (1008bp) protein (336aa)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671};; EC=1.1.1.369 {ECO:0000256|HAMAP-Rule:MF_01671};; Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5U4_9CLOT
L1_007_000M1_scaffold_3593_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9866..10882
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZ22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36172.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_000M1_scaffold_3593_14
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11569..12552)
DNA (984bp) protein (328aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oribacterium sinus F0268 RepID=C2L151_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEJ50279.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
putative ribose transport system permease RbsC
L1_007_000M1_scaffold_3593_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12545..13024)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38499.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ABC transporter ATP-binding protein
Displaying 15 items

View Taxonomy