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L1_007_000M1_scaffold_3881

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3881_1
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..903)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003053A77
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDL90557.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
transcriptional regulator with cupin sensor, AraC family
L1_007_000M1_scaffold_3881_2
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1109..1975)
DNA (867bp) protein (289aa)
AraC protein arabinose-binding/dimerization n=7 Tax=Pelosinus RepID=I8SCK3_9FIRM
AraC protein arabinose-binding/dimerization {ECO:0000313|EMBL:EIW18831.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
transcriptional regulator with cupin sensor, AraC family
L1_007_000M1_scaffold_3881_3
unknown

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comp(2258..2749)
DNA (492bp) protein (164aa)

This feature has no annotations

L1_007_000M1_scaffold_3881_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2803..3729)
DNA (927bp) protein (309aa)
Transcriptional regulator n=1 Tax=Clostridium ultunense Esp RepID=M1YZW2_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCQ96130.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
LacI family transcriptional regulator
L1_007_000M1_scaffold_3881_5
unknown

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comp(4080..4262)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_007_000M1_scaffold_3881_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4443..6086
DNA (1644bp) protein (548aa)
Sodium:solute symporter family protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A4Z8_CLOBO
sodium:solute symporter family protein
Transporter {ECO:0000313|EMBL:KEI04006.1}; TaxID=1443117 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 16868.;"
L1_007_000M1_scaffold_3881_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6204..7223
DNA (1020bp) protein (340aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Oscillibacter RepID=U2QT05_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERK65581.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
NAD-binding domain-containing oxidoreductase
L1_007_000M1_scaffold_3881_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7320..8327
DNA (1008bp) protein (336aa)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671};; EC=1.1.1.369 {ECO:0000256|HAMAP-Rule:MF_01671};; Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
idh; myo-inositol 2-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5U4_9CLOT
L1_007_000M1_scaffold_3881_9
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(8613..8840)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VGI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91386.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_3881_10
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8854..9729)
DNA (876bp) protein (292aa)
AraC protein arabinose-binding/dimerization n=6 Tax=Pelosinus RepID=I9LEI2_9FIRM
transcriptional regulator with cupin sensor, AraC family
Transcriptional regulator with cupin sensor, AraC family {ECO:0000313|EMBL:AIF50782.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
L1_007_000M1_scaffold_3881_11
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10047..11021
DNA (975bp) protein (325aa)
Inositol 2-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase {ECO:0000313|EMBL:AIF50792.1}; EC=1.1.1.18 {ECO:0000313|EMBL:AIF50792.1};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
Oxidoreductase domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC08_SPISS
L1_007_000M1_scaffold_3881_12
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11126..12508
DNA (1383bp) protein (461aa)
Sugar transporter n=2 Tax=Anaerostipes RepID=E5VY51_9FIRM
Sugar transporter {ECO:0000313|EMBL:EFV21292.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_007_000M1_scaffold_3881_13
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12522..13355
DNA (834bp) protein (278aa)
Inosose isomerase {ECO:0000313|EMBL:CDL90558.1}; EC=5.3.99.- {ECO:0000313|EMBL:CDL90558.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002DB0E30
xylose isomerase
L1_007_000M1_scaffold_3881_14
unknown

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comp(13829..14002)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 14 items

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