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L1_007_000M1_scaffold_1234

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1234_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(120..536)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Putative Holliday junction resolvase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX92_9CLOT
putative Holliday junction resolvase
L1_007_000M1_scaffold_1234_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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831..980
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY23_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
50S ribosomal protein L33
L1_007_000M1_scaffold_1234_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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999..1229
DNA (231bp) protein (77aa)
Protein translocase subunit SecE n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXQ5_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
secE; SecE
L1_007_000M1_scaffold_1234_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1247..1783
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2H6_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
NusG antitermination factor
L1_007_000M1_scaffold_1234_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1888..2313
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYH3_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
LSU ribosomal protein L11P
L1_007_000M1_scaffold_1234_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2412..3107
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX85_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rplA; 50S ribosomal protein L1
L1_007_000M1_scaffold_1234_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3287..4129
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38629.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L1_007_000M1_scaffold_1234_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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4175..5437
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N7V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC08088.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
uracil-xanthine permease
L1_007_000M1_scaffold_1234_9
unknown

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comp(5489..6355)
DNA (867bp) protein (289aa)

This feature has no annotations

L1_007_000M1_scaffold_1234_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6502..6777
DNA (276bp) protein (92aa)
Putative repressor protein CI n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P6S7_9FIRM
Putative repressor protein CI {ECO:0000313|EMBL:ERK46220.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted transcriptional regulators
L1_007_000M1_scaffold_1234_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6802..7869
DNA (1068bp) protein (356aa)
Phosphoglycerate dehydrogenase and related dehydrogenases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMH1_9FIRM
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CCY98516.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphoglycerate dehydrogenase and related dehydrogenases
L1_007_000M1_scaffold_1234_12
unknown

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comp(7944..8321)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0P6_9CLOT
L1_007_000M1_scaffold_1234_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8734..12135
DNA (3402bp) protein (1134aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34336.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cell surface protein
L1_007_000M1_scaffold_1234_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12255..12950
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H655_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96641.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000M1_scaffold_1234_15
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13054..13491
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BJ85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO85815.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L1_007_000M1_scaffold_1234_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13478..14812
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DEP4_CLODI
MATE efflux family protein {ECO:0000313|EMBL:EQF26364.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_1234_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15063..15542
DNA (480bp) protein (160aa)
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOQ36298.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_000M1_scaffold_1234_18
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15954..16370
DNA (417bp) protein (139aa)
Transcriptional regulators n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LAV7_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CDB79266.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Transcriptional regulators
L1_007_000M1_scaffold_1234_19
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16388..17050
DNA (663bp) protein (221aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K277_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CCY60850.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L1_007_000M1_scaffold_1234_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17145..18140)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39460.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_007_000M1_scaffold_1234_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18144..19085)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4M6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39461.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_007_000M1_scaffold_1234_22
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19783..19986
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68357.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L1_007_000M1_scaffold_1234_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20043..22166)
DNA (2124bp) protein (708aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pnp; Polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1B7_9CLOT
L1_007_000M1_scaffold_1234_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22476..22679)
DNA (204bp) protein (68aa)
30S ribosomal protein S15 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5B3_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
30S ribosomal protein S15
L1_007_000M1_scaffold_1234_25
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23608..23847
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61877.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
serine/threonine protein kinase
L1_007_000M1_scaffold_1234_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24058..24186)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35361.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
etfA; electron transfer flavoprotein alpha subunit
Displaying 26 items

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