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L1_007_000M1_scaffold_1261

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1261_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(450..1226)
DNA (777bp) protein (259aa)
Transglutaminase-like protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4U0_9CLOT
Transglutaminase-like protein {ECO:0000313|EMBL:EJF40560.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Transglutaminase-like superfamily.
L1_007_000M1_scaffold_1261_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1322..2104)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35747.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_007_000M1_scaffold_1261_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2130..2864)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT83_9CLOT
hypothetical protein
L1_007_000M1_scaffold_1261_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2934..3896)
DNA (963bp) protein (321aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTD6_9CLOT
L1_007_000M1_scaffold_1261_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4201..5232)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35750.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_007_000M1_scaffold_1261_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5287..6771)
DNA (1485bp) protein (495aa)
ctpA2; carboxy-terminal processing protease CtpA (EC:3.4.21.102)
C-terminal processing peptidase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTZ7_9CLOT
C-terminal processing peptidase {ECO:0000313|EMBL:EOQ35751.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_007_000M1_scaffold_1261_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6819..8516)
DNA (1698bp) protein (566aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
argS; Arginine-tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXU5_9CLOT
L1_007_000M1_scaffold_1261_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8557..9000)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35753.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_007_000M1_scaffold_1261_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9031..9828)
DNA (798bp) protein (266aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTE3_9CLOT
L1_007_000M1_scaffold_1261_10

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comp(9821..10891)
DNA (1071bp) protein (357aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
Putative D-alanine-D-alanine ligase n=1 Tax=uncultured organism RepID=C8C0Y9_9ZZZZ
Putative D-alanine-D-alanine ligase {ECO:0000313|EMBL:ACT97572.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L1_007_000M1_scaffold_1261_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11109..11426
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VU01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35756.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator, PadR family
L1_007_000M1_scaffold_1261_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11423..12082
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35757.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_007_000M1_scaffold_1261_13
unknown

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12079..12945
DNA (867bp) protein (289aa)

This feature has no annotations

L1_007_000M1_scaffold_1261_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13004..13213
DNA (210bp) protein (70aa)
Putative stress-responsive transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZZ8_9FIRM
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:CCY97008.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Putative stress-responsive transcriptional regulator
L1_007_000M1_scaffold_1261_15
unknown

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13254..13703
DNA (450bp) protein (150aa)

This feature has no annotations

L1_007_000M1_scaffold_1261_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13796..14530)
DNA (735bp) protein (245aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3K4_9CLOT
L1_007_000M1_scaffold_1261_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14527..15033)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4P4_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
16S rRNA processing protein RimM
L1_007_000M1_scaffold_1261_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15699..15929)
DNA (231bp) protein (77aa)
UPF0109 protein HMPREF1526_00181 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8M2_9CLOT
UPF0109 protein HMPREF1526_00181 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_007_000M1_scaffold_1261_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15944..16186)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3T7_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
30S ribosomal protein S16
L1_007_000M1_scaffold_1261_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16251..17609)
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W473_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ffh; signal recognition particle protein
L1_007_000M1_scaffold_1261_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17611..17982)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3K8_9CLOT
UPF0122 protein HMPREF1526_00184 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
helix-turn-helix protein YlxM/p13 family protein
L1_007_000M1_scaffold_1261_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18164..21157)
DNA (2994bp) protein (998aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFK2_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDE50113.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
diguanylate cyclase (GGDEF) domain
L1_007_000M1_scaffold_1261_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21200..22624)
DNA (1425bp) protein (475aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8W9_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE48304.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_1261_24
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22990..23520
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DPM2_CLOS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23268.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Displaying 24 items

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