ggKbase home page

L1_007_000M1_scaffold_2297

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2297_1
unknown

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_007_000M1_scaffold_2297_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(302..970)
DNA (669bp) protein (223aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYY8_9CLOT
L1_007_000M1_scaffold_2297_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(993..2009)
DNA (1017bp) protein (339aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
plsX; acyl-ACP--phosphate acyltransferase (EC:2.3.1.-)
Phosphate acyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUJ1_9CLOT
L1_007_000M1_scaffold_2297_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2011..3315)
DNA (1305bp) protein (435aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
trmFO; tRNA methyltransferase (EC:2.1.1.74)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTR3_9CLOT
L1_007_000M1_scaffold_2297_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3312..5831)
DNA (2520bp) protein (840aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
topA; DNA topoisomerase 1 (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VV53_9CLOT
L1_007_000M1_scaffold_2297_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6067..7314)
DNA (1248bp) protein (416aa)
DNA protecting protein DprA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYZ2_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:EOQ36142.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative smf protein
L1_007_000M1_scaffold_2297_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7328..8005)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36143.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
RNA methyltransferase
L1_007_000M1_scaffold_2297_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8092..8748)
DNA (657bp) protein (219aa)
TrkA N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2D1_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:EDM97518.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ktrC; NAD-binding site
L1_007_000M1_scaffold_2297_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8840..10210)
DNA (1371bp) protein (457aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
Putative ATP synthase F0, A subunit n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2D2_9FIRM
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EDM97519.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_007_000M1_scaffold_2297_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10914..12287)
DNA (1374bp) protein (458aa)
TRAP transporter, DctM subunit n=2 Tax=Oscillibacter RepID=U2QX47_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ERK63301.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dctM5; protein DctM5
L1_007_000M1_scaffold_2297_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12284..12826)
DNA (543bp) protein (181aa)
TRAP transporter, DctQ-like membrane protein n=2 Tax=Oscillibacter RepID=U2QK75_9FIRM
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:ERK63300.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dctQ5; TRAP-type transporter, small permease component
L1_007_000M1_scaffold_2297_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12889..14040)
DNA (1152bp) protein (384aa)
Bacterial extracellular solute-binding protein, family 7 n=2 Tax=Oscillibacter RepID=U2R440_9FIRM
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ERK63299.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dctP5; TRAP transporter substrate-binding protein
L1_007_000M1_scaffold_2297_13
unknown

Not on your lists

comp(14134..14223)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 13 items

View Taxonomy