ggKbase home page

L1_007_000M1_scaffold_2556

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2556_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

322..1881
DNA (1560bp) protein (520aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Ribonuclease Y n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5Y9_9CLOT
metal dependent phosphohydrolase
L1_007_000M1_scaffold_2556_2
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1942..3711)
DNA (1770bp) protein (590aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
Membrane associated histidine kinase with HAMP domain n=1 Tax=Clostridium novyi (strain NT) RepID=A0PYZ3_CLONN
histidine kinase
L1_007_000M1_scaffold_2556_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3708..4385)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45622.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
PhoB family transcriptional regulator
L1_007_000M1_scaffold_2556_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4531..5322)
DNA (792bp) protein (264aa)
TIGR01457 family HAD hydrolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTX4_9CLOT
TIGR01457 family HAD hydrolase {ECO:0000313|EMBL:EOQ35963.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
N-acetylglucosamine phosphatase
L1_007_000M1_scaffold_2556_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5676..7001)
DNA (1326bp) protein (442aa)
Aspartate-tRNA(Asn) ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYW0_9CLOT
Aspartate-tRNA(Asn) ligase {ECO:0000313|EMBL:EOQ36107.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
aspartyl-tRNA synthetase
L1_007_000M1_scaffold_2556_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7110..8555)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36105.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
polysaccharide biosynthesis protein
L1_007_000M1_scaffold_2556_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8872..11103
DNA (2232bp) protein (744aa)
Polysaccharide pyruvyl transferase CsaB n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VU79_9CLOT
Polysaccharide pyruvyl transferase CsaB {ECO:0000313|EMBL:EOQ36103.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative polysaccharide pyruvyl transferase
L1_007_000M1_scaffold_2556_8
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11166..12353
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX54_9FIRM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
L1_007_000M1_scaffold_2556_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12631..13122
DNA (492bp) protein (164aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYV6_9CLOT
L1_007_000M1_scaffold_2556_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13457..13771
DNA (315bp) protein (105aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VV18_9CLOT
Displaying 10 items

View Taxonomy