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L1_007_029G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_62_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..3316
DNA (3315bp) protein (1105aa)
carB; Carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Carbamoyl-phosphate synthase large chain n=4 Tax=Bifidobacterium breve RepID=F9XXS4_BIFBU
L1_007_029G1_scaffold_62_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3316..4236
DNA (921bp) protein (307aa)
pyrF_2; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EFE89157.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EFE89157.1};; Putative orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:BAQ99618.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Orotidine 5'-phosphate decarboxylase n=6 Tax=Bifidobacterium breve RepID=F6C588_BIFBA
L1_007_029G1_scaffold_62_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4273..4863
DNA (591bp) protein (197aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Guanylate kinase n=4 Tax=Bifidobacterium breve RepID=F6C587_BIFBA
L1_007_029G1_scaffold_62_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4885..5592)
DNA (708bp) protein (236aa)
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:AEF26704.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEF26704.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Exonuclease, DNA polymerase III, epsilon subunit family n=3 Tax=Bifidobacterium breve RepID=F6C586_BIFBA
DNA polymerase III alpha subunit
L1_007_029G1_scaffold_62_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5717..6175)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CSX1_BIFBR
Hypothetical protein, very proline rich
Uncharacterized protein {ECO:0000313|EMBL:ERI87153.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_62_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6358..8544
DNA (2187bp) protein (729aa)
Tetracycline resistance protein TetQ n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1H1_BIFBR
Putative translation elongation and release factor
Putative translation elongation factor G {ECO:0000313|EMBL:AEF27212.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_62_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8525..9193)
DNA (669bp) protein (223aa)
Phospholipase/carboxylesterase n=3 Tax=Bifidobacterium breve RepID=D4BNC5_BIFBR
Putative esterase {ECO:0000313|EMBL:BAQ99623.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phospholipase/carboxylesterase
L1_007_029G1_scaffold_62_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9342..10574
DNA (1233bp) protein (411aa)
metC_1; cystathionine beta-lyase (EC:4.4.1.8)
Cys/Met metabolism PLP-dependent enzyme n=3 Tax=Bifidobacterium breve RepID=F6C582_BIFBA
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EFE89163.1}; Cystathionine beta-lyase {ECO:0000313|EMBL:BAQ99624.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_62_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10981..11232
DNA (252bp) protein (84aa)
Glutaredoxin n=3 Tax=Bifidobacterium breve RepID=F6C581_BIFBA
Glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AHJ20822.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11896..12063
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C579_BIFBA
Cth
Cth {ECO:0000313|EMBL:AHJ20823.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12223..13134
DNA (912bp) protein (304aa)
SPFH/Band 7/PHB domain protein n=6 Tax=Bifidobacterium breve RepID=F6C578_BIFBA
Hypothetical protein, Hypothetical secreted protease
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:AEF26497.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_62_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13492..13725
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRM0_BIFBR
Hypothetical protein, ATPase
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_62_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13746..13928
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C9I8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein, ATPase
L1_007_029G1_scaffold_62_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13991..14836)
DNA (846bp) protein (282aa)
Phospholipase, patatin family n=3 Tax=Bifidobacterium breve RepID=F6C577_BIFBA
Phospholipase
Phospholipase {ECO:0000313|EMBL:AHJ20826.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14963..15757)
DNA (795bp) protein (265aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glutamate racemase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C576_BIFBA
L1_007_029G1_scaffold_62_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15888..16787
DNA (900bp) protein (300aa)
dapF; Diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Diaminopimelate epimerase n=2 Tax=Bifidobacterium breve RepID=F9XXT6_BIFBU
L1_007_029G1_scaffold_62_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16856..17575)
DNA (720bp) protein (240aa)
Vitamin K epoxide reductase family n=3 Tax=Bifidobacterium breve RepID=F6C574_BIFBA
putative membrane spanning protein, contains a vitamin K epoxide reductase domain
Vitamin K epoxide reductase family {ECO:0000313|EMBL:AEF26895.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_62_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17702..18595
DNA (894bp) protein (298aa)
PHP domain containing protein (TRPH) n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY15_BIFBU
PHP domain containing protein (TRPH)
PHP domain containing protein (TRPH) {ECO:0000313|EMBL:AHJ20830.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18652..18876)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BND9_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20831.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18982..20613)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZH0_BIFBR
phosphotransferase enzyme domain protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87137.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_62_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20696..22243
DNA (1548bp) protein (516aa)
UvrD/REP helicase (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
UvrD/REP helicase n=2 Tax=Bifidobacterium breve RepID=F6C570_BIFBA
L1_007_029G1_scaffold_62_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22314..24044)
DNA (1731bp) protein (577aa)
hydrolase n=1 Tax=Bifidobacterium breve RepID=UPI0002F672A9
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20834.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24125..25135
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY20_BIFBU
Conserved hypothetical protein, contains Lon protease motif
Uncharacterized protein {ECO:0000313|EMBL:ABE95345.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_62_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25227..25643
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C567_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28043.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_62_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25968..27566
DNA (1599bp) protein (533aa)
DivIVA domain repeat protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C566_BIFBA
DivIVA domain repeat-containing protein
DivIVA domain repeat protein {ECO:0000313|EMBL:AEF27018.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_62_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27563..28753
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E438_BIFBR
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L1_007_029G1_scaffold_62_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28750..29973
DNA (1224bp) protein (408aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=5 Tax=Bifidobacterium breve RepID=F6C564_BIFBA
L1_007_029G1_scaffold_62_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30048..31796
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRN8_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20840.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_62_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31829..32548
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium breve RepID=F6C562_BIFBA
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_62_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32545..33339
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Isoprenyl transferase n=5 Tax=Bifidobacterium breve RepID=F9XY27_BIFBU
Undecaprenyl pyrophosphate synthetase
Displaying items 1-30 of 41 in total

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