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L1_007_029G1_scaffold_122

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_122_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..896
DNA (894bp) protein (298aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Beta-galactosidase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMY8_BIFBR
beta-galactosidase
L1_007_029G1_scaffold_122_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1021..2034
DNA (1014bp) protein (338aa)
Transcriptional regulator n=2 Tax=Bifidobacterium longum RepID=E8MH60_BIFL2
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ66113.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_122_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2154..3854)
DNA (1701bp) protein (567aa)
L-arabinofuranosidase n=1 Tax=Bifidobacterium longum E18 RepID=V6XZQ2_BIFLN
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:AIW43437.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
alpha-L-arabinofuranosidase
L1_007_029G1_scaffold_122_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4014..5366
DNA (1353bp) protein (451aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSZ3_BIFLJ
family 1 extracellular solute-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ADG99998.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_029G1_scaffold_122_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5698..7041
DNA (1344bp) protein (448aa)
MalE-type ABC sugar transport system periplasmic component n=19 Tax=Bacteria RepID=B3DT99_BIFLD
sugar ABC transporter substrate-binding protein
MalE-type ABC sugar transport system periplasmic component {ECO:0000313|EMBL:ACD98368.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_122_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7157..8578
DNA (1422bp) protein (474aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUR6_BIFLN
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEI81193.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
male-type abc sugar transport system periplasmic component
L1_007_029G1_scaffold_122_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8638..9408)
DNA (771bp) protein (257aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Type III pantothenate kinase n=6 Tax=Bifidobacterium RepID=COAX_BIFLD
L1_007_029G1_scaffold_122_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9534..11153
DNA (1620bp) protein (540aa)
ABC-type dipeptide transport system periplasmic component n=8 Tax=Bifidobacterium longum RepID=B3DT96_BIFLD
Solute binding protein of ABC transporter systemy for peptides {ECO:0000313|EMBL:AAN24966.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
ddpA2; dipeptide ABC transporter substrate-binding protein
L1_007_029G1_scaffold_122_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11218..12195
DNA (978bp) protein (326aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9L5_BIFLN
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBK70868.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_029G1_scaffold_122_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12192..13094
DNA (903bp) protein (301aa)
Peptides ABC transporter permease component n=9 Tax=Bifidobacterium RepID=E8MH68_BIFL2
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY32461.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_122_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13091..13882
DNA (792bp) protein (264aa)
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component n=9 Tax=Bifidobacterium longum RepID=B3DT93_BIFLD
dppD; dipeptide/oligopeptide/nickel ABC transporter ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI81188.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_122_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13875..14660
DNA (786bp) protein (262aa)
ABC-type oligopeptide transport system ATPase component n=7 Tax=Bifidobacterium RepID=B3DT92_BIFLD
peptide ABC transporter ATP-binding protein
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KEY32463.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_122_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15051..16118
DNA (1068bp) protein (356aa)
Cystathionine beta-synthase n=5 Tax=Bifidobacterium longum RepID=Q8G564_BIFLO
cysK; cysk
Cysteine synthase {ECO:0000313|EMBL:ACD98360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_122_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16210..17394
DNA (1185bp) protein (395aa)
cystathionine gamma-lyase (EC:2.5.1.48 4.4.1.1)
Cystathionine beta-lyase {ECO:0000313|EMBL:EEQ54199.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EEQ54199.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Cystathionine gamma-lyase n=6 Tax=Bifidobacterium RepID=D6D9L1_BIFLN
L1_007_029G1_scaffold_122_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17535..19259)
DNA (1725bp) protein (575aa)
L,D-transpeptidase catalytic domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASW3_BIFLN
Peptidase {ECO:0000313|EMBL:KEY23276.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L1_007_029G1_scaffold_122_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19419..21374
DNA (1956bp) protein (652aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Bifidobacterium longum RepID=Q8G567_BIFLO
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AAN24958.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
recQ; ATP-dependent DNA helicase RecQ
L1_007_029G1_scaffold_122_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21487..21981
DNA (495bp) protein (165aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
S-ribosylhomocysteine lyase n=12 Tax=Bifidobacterium RepID=LUXS_BIFLD
S-ribosylhomocysteinase
L1_007_029G1_scaffold_122_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22193..22678
DNA (486bp) protein (162aa)
Acetyltransferase (GNAT) domain protein n=5 Tax=Bifidobacterium longum RepID=I3ASX6_BIFLN
wecD; wecd
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66129.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_122_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22936..24075)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUQ2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81179.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Protein of unknown function (DUF2961).
L1_007_029G1_scaffold_122_20
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24154..25032)
DNA (879bp) protein (293aa)
Sugar ABC transporter, permease protein n=3 Tax=Bifidobacterium dentium RepID=D2Q7F9_BIFDB
ABC transporter permease {ECO:0000313|EMBL:KFJ01388.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
sugar ABC transporter permease
L1_007_029G1_scaffold_122_21
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25106..26047)
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BV47_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KFJ01389.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
ABC transporter permease
L1_007_029G1_scaffold_122_22
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26186..27490)
DNA (1305bp) protein (435aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QAA3_9BIFI
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFJ01390.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
ABC transporter, solute-binding protein
L1_007_029G1_scaffold_122_23
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27734..28765)
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SMK5_9BIFI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERH31887.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
LacI family transcriptional regulator
L1_007_029G1_scaffold_122_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29463..30923)
DNA (1461bp) protein (487aa)
Amino acid permease-associated region n=3 Tax=Bifidobacterium longum RepID=D6ZT09_BIFLJ
amino acid permease-associated domain-containing protein
Putative amino acid transport protein {ECO:0000313|EMBL:BAP83164.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_029G1_scaffold_122_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31117..32469
DNA (1353bp) protein (451aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Alanine racemase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS79_BIFL1
alanine racemase
L1_007_029G1_scaffold_122_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32580..33887
DNA (1308bp) protein (436aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=DGTL1_BIFLO
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_122_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34051..36159
DNA (2109bp) protein (703aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
DnaG n=2 Tax=Bifidobacterium RepID=E4QZV6_BIFLM
dnaG; dnag
L1_007_029G1_scaffold_122_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36354..36980
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=C2GUP6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44607.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_122_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36977..37372
DNA (396bp) protein (132aa)
Transcriptional regulator n=4 Tax=Bifidobacterium longum subsp. longum RepID=F8AS06_BIFLN
transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EIJ23192.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_122_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37472..37660
DNA (189bp) protein (63aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBI8_BIFBR
pyridoxal biosynthesis lyase PdxS
Displaying 30 items

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