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L1_007_029G1_scaffold_143

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_143_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..418
DNA (417bp) protein (139aa)
Glyceraldehyde-3-phosphate dehydrogenase, type I {ECO:0000313|EMBL:EIJ24648.1}; EC=1.2.1.- {ECO:0000313|EMBL:EIJ24648.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glyceraldehyde-3-phosphate dehydrogenase n=18 Tax=Bifidobacterium RepID=B3DQS9_BIFLD
glyceraldehyde 3-phosphate dehydrogenase
L1_007_029G1_scaffold_143_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

497..1006
DNA (510bp) protein (170aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=14 Tax=Bifidobacterium RepID=B3DQS8_BIFLD
hypothetical protein
L1_007_029G1_scaffold_143_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1046..2038)
DNA (993bp) protein (331aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=12 Tax=Bifidobacterium RepID=ISPH_BIFLO
L1_007_029G1_scaffold_143_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2329..3285
DNA (957bp) protein (319aa)
Galactose mutarotase n=11 Tax=Bifidobacterium RepID=B3DQS6_BIFLD
aldose-1-epimerase
Galactose mutarotase {ECO:0000313|EMBL:ACD97672.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3411..4355
DNA (945bp) protein (315aa)
Galactose mutarotase n=7 Tax=Bifidobacterium RepID=B3DQS5_BIFLD
aldose-1-epimerase
Galactose mutarotase {ECO:0000313|EMBL:ACD97671.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4621..4941)
DNA (321bp) protein (107aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DQS3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25158.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_143_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4941..5693)
DNA (753bp) protein (251aa)
RNA polymerase sigma-E factor n=10 Tax=Bifidobacterium RepID=Q8G4M2_BIFLO
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AEI97264.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_029G1_scaffold_143_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5868..7421
DNA (1554bp) protein (518aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=7 Tax=Bifidobacterium RepID=MURE_BIFLO
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
L1_007_029G1_scaffold_143_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7543..8538
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4M4_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25155.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_143_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8657..12334)
DNA (3678bp) protein (1226aa)
Chromosome partition protein Smc n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBX7_BIFLI
condensin subunit Smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_029G1_scaffold_143_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12395..14026)
DNA (1632bp) protein (544aa)
Folylpolyglutamate synthase n=2 Tax=Bifidobacterium longum RepID=B3DQR8_BIFLD
folC; folylpolyglutamate synthase
Folylpolyglutamate synthase {ECO:0000313|EMBL:ACD97664.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15491..16096
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQR7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97663.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16400..17995
DNA (1596bp) protein (532aa)
Xaa-Pro aminopeptidase n=2 Tax=Bifidobacterium longum RepID=E8MDZ3_BIFL2
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:BAJ66920.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_143_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18044..18565
DNA (522bp) protein (174aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=Q8G4M9_BIFLO
hypothetical protein
NUDIX domain protein {ECO:0000313|EMBL:EIJ30718.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_143_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18615..20324)
DNA (1710bp) protein (570aa)
ABC-type peptide transport system ATPase component n=15 Tax=Bifidobacterium RepID=B3DQR4_BIFLD
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KEY25602.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
ABC transporter ATP-binding protein
L1_007_029G1_scaffold_143_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20328..21497)
DNA (1170bp) protein (390aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=14 Tax=Bifidobacterium RepID=D6DCT1_BIFLN
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ24628.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_143_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21499..22590)
DNA (1092bp) protein (364aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease component n=12 Tax=Bifidobacterium RepID=B3DQR2_BIFLD
dppB1; dipeptide/oligopeptide/nickel ABC transporter permease
Oligopeptide ABC transporter permease OppB {ECO:0000313|EMBL:ESV33808.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_029G1_scaffold_143_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22755..24389)
DNA (1635bp) protein (545aa)
ABC-type dipeptide transport system periplasmic component n=3 Tax=Bifidobacterium RepID=B3DQR1_BIFLD
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY31476.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ddpA1; ddpa1
L1_007_029G1_scaffold_143_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24669..25952)
DNA (1284bp) protein (428aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQR0_BIFLD
nagA; glucosamine-6-phosphate isomerase
L1_007_029G1_scaffold_143_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26008..26820)
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glucosamine-6-phosphate deaminase n=3 Tax=Bifidobacterium longum RepID=NAGB_BIFLD
nagB; glucosamine-6-phosphate deaminase
L1_007_029G1_scaffold_143_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27158..28282
DNA (1125bp) protein (375aa)
NagC-type transcriptional regulator n=4 Tax=Bifidobacterium longum RepID=B3DQQ8_BIFLD
ROK family protein
NagC-type transcriptional regulator {ECO:0000313|EMBL:ACD97654.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28422..29336)
DNA (915bp) protein (305aa)
NagC-type transcriptional regulator n=2 Tax=Bifidobacterium longum RepID=B3DQQ7_BIFLD
NagC family transcriptional regulator
NagC-type transcriptional regulator {ECO:0000313|EMBL:ACD97653.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_23
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29563..30777
DNA (1215bp) protein (405aa)
NagC-type transcriptional regulator n=2 Tax=Bifidobacterium RepID=B3DQQ6_BIFLD
NagC family transcriptional regulator
NagC-type transcriptional regulator {ECO:0000313|EMBL:CCY95714.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_143_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30850..31746
DNA (897bp) protein (299aa)
Sugar kinases, ribokinase family n=4 Tax=Bifidobacterium longum RepID=D6DCS5_BIFLN
PfkB domain-containing protein
Protein in PfkB family of sugar kinases {ECO:0000313|EMBL:AAN25139.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_143_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31823..32212
DNA (390bp) protein (130aa)
Lactoylglutathione lyase n=10 Tax=Bifidobacterium RepID=B3DQQ4_BIFLD
glyoxalase
Glyoxalase {ECO:0000313|EMBL:KEY25612.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_143_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32321..32431
DNA (111bp) protein (37aa)
Fucose permease n=8 Tax=Bifidobacterium RepID=B3DQQ3_BIFLD
fucose permease
Uncharacterized protein {ECO:0000313|EMBL:EIJ23828.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_143_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32498..32800
DNA (303bp) protein (101aa)
Fucose permease n=2 Tax=Bifidobacterium RepID=B3DQQ2_BIFLD
fucP1; fucose permease
Fucose permease {ECO:0000313|EMBL:ACD97648.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_143_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33075..34373
DNA (1299bp) protein (433aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=V6XX94_BIFLN
glycosyl hydrolase
PF06824 family protein {ECO:0000313|EMBL:EIJ23827.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_143_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34440..34517
DNA (78bp) protein (26aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUK1_BIFL1
N-acylglucosamine 2-epimerase family protein
N-acylglucosamine 2-epimerase family protein {ECO:0000313|EMBL:AHJ21307.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 29 items

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