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L1_007_029G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_144_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

318..2606
DNA (2289bp) protein (763aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
DNA helicase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMM8_LACRL
DNA helicase
L1_007_029G1_scaffold_144_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2730..3557
DNA (828bp) protein (276aa)
Bacterial regulatory helix-turn-helix, lysR family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V066_LACRH
LysR family transcriptional regulator YeiE
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEN81169.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_144_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3624..4595)
DNA (972bp) protein (324aa)
tellurium resistance protein, partial n=1 Tax=Lactobacillus rhamnosus RepID=UPI00035CAFBF
ydiA; tellurite resistance protein-like permease
Tellurium resistance protein {ECO:0000313|EMBL:KIC98127.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_144_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5137..5901)
DNA (765bp) protein (255aa)
ABC transporter, permease protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TMN1_LACRL
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5882..6640)
DNA (759bp) protein (253aa)
ABC transporter, ATPase component n=5 Tax=Lactobacillus rhamnosus RepID=C7TMN2_LACRL
ABC transporter family protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP75309.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6794..7492
DNA (699bp) protein (233aa)
Helix-turn-helix domain protein n=3 Tax=Lactobacillus rhamnosus RepID=G7V070_LACRH
helix-turn-helix domain-containing protein
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AGP75310.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7636..8283)
DNA (648bp) protein (216aa)
Predicted metal-dependent membrane protease n=7 Tax=Lactobacillus rhamnosus RepID=B5QLV8_LACRH
putative metal-dependent membrane protease
Metal-dependent membrane protease {ECO:0000313|EMBL:EGF47861.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
L1_007_029G1_scaffold_144_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8615..10222)
DNA (1608bp) protein (536aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JUV5_LACRH
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN81178.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC transporter ATPase/permease
L1_007_029G1_scaffold_144_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10428..11072)
DNA (645bp) protein (215aa)
HD domain protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMN6_LACRL
yagB; HD domain-containing protein
Phosphohydrolase {ECO:0000313|EMBL:KIC98132.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_144_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11224..11640
DNA (417bp) protein (139aa)
Transcriptional regulator n=12 Tax=Lactobacillus rhamnosus RepID=C8UXE7_LACRG
MarR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EKS48629.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L1_007_029G1_scaffold_144_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11809..14337
DNA (2529bp) protein (843aa)
Excinuclease ABC subunit A n=4 Tax=Lactobacillus rhamnosus RepID=S5A9B9_LACRH
Excinuclease ABC subunit A {ECO:0000313|EMBL:AGP75315.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Excinuclease ABC subunit A
L1_007_029G1_scaffold_144_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14447..15454)
DNA (1008bp) protein (336aa)
Aldo/keto reductase (Oxidoreductase) n=6 Tax=Lactobacillus rhamnosus RepID=C7TMN9_LACRL
yghZ; aldo/keto reductase
Aryl-alcohol dehydrogenase related enzyme {ECO:0000313|EMBL:AGP75316.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15560..16372)
DNA (813bp) protein (271aa)
HAD hydrolase, IIB family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V077_LACRH
HAD hydrolase
HAD family hydrolase {ECO:0000313|EMBL:KIC98136.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_144_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16563..16907)
DNA (345bp) protein (115aa)
Conserved protein n=12 Tax=Lactobacillus rhamnosus RepID=C7T7J0_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR88527.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI43055.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L1_007_029G1_scaffold_144_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17399..17662
DNA (264bp) protein (88aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7T7J1_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR88528.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI43056.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L1_007_029G1_scaffold_144_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17952..18641
DNA (690bp) protein (230aa)
Conserved membrane protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMP4_LACRL
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81188.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_144_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18638..19327)
DNA (690bp) protein (230aa)
Phosphoglycerate mutase n=8 Tax=Lactobacillus rhamnosus RepID=C7T7J3_LACRG
histidine phosphatase super family protein
Phosphoglycerate mutase family {ECO:0000313|EMBL:AGP75323.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19371..20183)
DNA (813bp) protein (271aa)
Hydrolase of the HAD superfamily n=6 Tax=Lactobacillus rhamnosus RepID=C7TMP6_LACRL
folE; HAD superfamily hydrolase
HAD family hydrolase {ECO:0000313|EMBL:KIC98141.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_144_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20277..20759
DNA (483bp) protein (161aa)
RNase H with double-stranded RNA/RNA-DNA hybrid binding domain n=10 Tax=Lactobacillus rhamnosus RepID=B5QLU1_LACRH
rnh; ribonuclease H domain protein
Ribonuclease HI {ECO:0000313|EMBL:AGP75325.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20765..21775)
DNA (1011bp) protein (337aa)
LysR family transcriptional regulator n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2IRR9_LACRH
LysR substrate binding domain protein {ECO:0000313|EMBL:EEN81184.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
yoaU2; LysR family transcriptional regulator
L1_007_029G1_scaffold_144_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21955..23157
DNA (1203bp) protein (401aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEN81183.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEN81183.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Aminotransferase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMP9_LACRL
avtA; aminotransferase
L1_007_029G1_scaffold_144_22
unknown

Not on your lists

23252..23422
DNA (171bp) protein (57aa)

This feature has no annotations

L1_007_029G1_scaffold_144_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23544..23849)
DNA (306bp) protein (102aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMQ1_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75329.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24211..24537
DNA (327bp) protein (109aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7T7K0_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75330.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(24743..25930)
DNA (1188bp) protein (396aa)
Protein RecA n=6 Tax=Lactobacillus rhamnosus RepID=B5QRV4_LACRH
recA; RecA recombinase
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_144_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26179..26880
DNA (702bp) protein (234aa)
Conserved membrane protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TMQ4_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75332.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26944..27417)
DNA (474bp) protein (158aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMQ5_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75333.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27515..27628)
DNA (114bp) protein (38aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S5A6J5_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75334.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27749..28003)
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TMQ6_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75335.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_144_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28338..30320)
DNA (1983bp) protein (661aa)
PTS system, fructose-specific IIABC component n=4 Tax=Lactobacillus rhamnosus RepID=C7TMQ7_LACRL
PTS system, galactose-inducible IIBC component {ECO:0000313|EMBL:AGP75336.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
tagT; PTS system fructose-specific transporter subunit IIABC
Displaying items 1-30 of 34 in total

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