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L1_007_029G1_scaffold_151

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_151_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSX8_BIFLJ
family 3 extracellular solute-binding protein
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ADG99983.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_029G1_scaffold_151_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(552..1028)
DNA (477bp) protein (159aa)
SsrA-binding protein n=20 Tax=Bifidobacterium RepID=SSRP_BIFLD
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_151_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1171..2526)
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS48_BIFL1
Amidase {ECO:0000313|EMBL:KEY33160.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_029G1_scaffold_151_4
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2629..3552)
DNA (924bp) protein (308aa)
Cell division protein FtsX n=8 Tax=Bifidobacterium RepID=D6D9N4_BIFLN
ftsX; ftsx
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_029G1_scaffold_151_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3564..4733)
DNA (1170bp) protein (390aa)
FtsE-like ATP binding protein involved in cell division n=2 Tax=Bifidobacterium longum RepID=F8ASC4_BIFLN
Cell division protein FtsE {ECO:0000313|EMBL:KEY33162.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ftsE; FtsE-like ATP binding protein involved in cell division
L1_007_029G1_scaffold_151_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4742..5866)
DNA (1125bp) protein (375aa)
Peptide chain release factor 2 n=15 Tax=Bifidobacterium longum RepID=B3DTB9_BIFLD
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_151_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6249..7712)
DNA (1464bp) protein (488aa)
DNA polymerase III epsilon subunit n=3 Tax=Bifidobacterium longum RepID=B3DTC0_BIFLD
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:ACD98389.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_151_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7709..8362)
DNA (654bp) protein (218aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Peptide deformylase 1 n=12 Tax=Bifidobacterium RepID=DEF1_BIFLO
def2; def2
L1_007_029G1_scaffold_151_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8387..9364)
DNA (978bp) protein (326aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoglucosamine mutase n=14 Tax=Bifidobacterium RepID=GLMM_BIFLD
phosphomannomutase
L1_007_029G1_scaffold_151_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9372..9854
DNA (483bp) protein (161aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=I3AST1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32204.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_151_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9868..10107)
DNA (240bp) protein (80aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DTC3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ21877.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_151_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10123..10455)
DNA (333bp) protein (111aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G531_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP83126.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_029G1_scaffold_151_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10654..11550)
DNA (897bp) protein (299aa)
Sulfite exporter TauE/SafE n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AST8_BIFLN
sulfite exporter TauE/SafE
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:AIW43416.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_151_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11728..14337)
DNA (2610bp) protein (870aa)
Aminopeptidase N n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSW3_BIFLJ
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:ADG99968.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_029G1_scaffold_151_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14379..16178)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G528_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54238.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_151_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16221..17147)
DNA (927bp) protein (309aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Bifidobacterium longum RepID=D6ZSW1_BIFLJ
dihydrodipicolinate synthase
L1_007_029G1_scaffold_151_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17289..18044)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Bifidobacterium RepID=B3DTC9_BIFLD
dapB; dihydrodipicolinate reductase
L1_007_029G1_scaffold_151_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18260..19579)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DTD0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98399.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_151_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19791..23822)
DNA (4032bp) protein (1344aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) (EC:3.6.1.-)
UvrD/REP helicase N-terminal domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASN4_BIFLN
L1_007_029G1_scaffold_151_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23819..28129)
DNA (4311bp) protein (1437aa)
ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Bifidobacterium longum E18 RepID=V6XX18_BIFLN
ATP-dependent DNA helicase, UvrD/REP family {ECO:0000313|EMBL:ESV33031.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L1_007_029G1_scaffold_151_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28261..29682
DNA (1422bp) protein (474aa)
Serine/threonine protein kinase n=13 Tax=Bifidobacterium RepID=B3DTD3_BIFLD
kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACD98402.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_151_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29849..35833
DNA (5985bp) protein (1995aa)
Large protein with C-terminal fibronectin type III domain n=3 Tax=Bifidobacterium longum RepID=Q8G521_BIFLO
Large protein with C-terminal fibronectin type III domain {ECO:0000313|EMBL:AAN25004.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L1_007_029G1_scaffold_151_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35844..37217
DNA (1374bp) protein (458aa)
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:CCK34449.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCK34449.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
ATPase associated with various cellular activities family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZL4_BIFLN
ATPase
L1_007_029G1_scaffold_151_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37242..38465
DNA (1224bp) protein (408aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B3DTD6_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KEY33180.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_029G1_scaffold_151_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38462..40975
DNA (2514bp) protein (838aa)
Transglutaminase-like enzymes, putative cysteine proteases n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9Q2_BIFLN
Transglutaminase-like enzymes, putative cysteine proteases
Transglutaminase-like enzymes, putative cysteine proteases {ECO:0000313|EMBL:CBK70905.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_029G1_scaffold_151_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40972..41904
DNA (933bp) protein (311aa)
Phosphatase n=10 Tax=Bifidobacterium longum RepID=F8ASE6_BIFLN
phosphatase
Protein phosphatase {ECO:0000313|EMBL:KEY23323.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_151_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41931..42446
DNA (516bp) protein (172aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C5E852_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54250.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_151_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42462..43094
DNA (633bp) protein (211aa)
Forkhead domain protein n=14 Tax=Bacteria RepID=E4R014_BIFLM
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:AIW43402.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_151_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43253..47290)
DNA (4038bp) protein (1346aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
DNA-directed RNA polymerase subunit beta' n=13 Tax=Bacteria RepID=RPOC_BIFLD
rpoC; rpoc
L1_007_029G1_scaffold_151_30
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47458..48615)
DNA (1158bp) protein (386aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
DNA-directed RNA polymerase subunit beta n=4 Tax=Bifidobacterium longum RepID=C5E855_BIFLI
rpoB; DNA-directed RNA polymerase subunit beta
Displaying 30 items

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