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L1_007_029G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_154_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..888)
DNA (888bp) protein (296aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPJ2_BIFLS
activase
Activator of 2-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:ACD99376.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_154_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(911..1489)
DNA (579bp) protein (193aa)
2-hydroxyglutaryl-CoA dehydratase, D-component-like protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3AYA1_BIFLN
CoA-substrate-specific enzyme activating protein
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EEQ55429.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_154_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1685..2413)
DNA (729bp) protein (243aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EIJ28388.1}; EC=1.97.1.4 {ECO:0000313|EMBL:EIJ28388.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=17 Tax=Bifidobacterium RepID=B3DRJ3_BIFLD
ribonucleoside-triphosphate reductase activating protein
L1_007_029G1_scaffold_154_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2561..4969)
DNA (2409bp) protein (803aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EIJ25135.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EIJ25135.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribonucleoside-triphosphate reductase class III catalytic subunit n=15 Tax=Bifidobacterium RepID=D6DBN6_BIFLN
ribonucleoside triphosphate reductase
L1_007_029G1_scaffold_154_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5449..6807
DNA (1359bp) protein (453aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Exodeoxyribonuclease 7 large subunit n=12 Tax=Bifidobacterium RepID=E8MEQ0_BIFL2
exodeoxyribonuclease VII large subunit
L1_007_029G1_scaffold_154_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6857..7159
DNA (303bp) protein (101aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Exodeoxyribonuclease 7 small subunit n=12 Tax=Bifidobacterium RepID=D6DBN8_BIFLN
exodeoxyribonuclease VII small subunit
L1_007_029G1_scaffold_154_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7283..7807
DNA (525bp) protein (175aa)
NAD(P)H oxidoreductase n=7 Tax=Bifidobacterium RepID=V6XZW5_BIFLN
Putative NADPH-quinone reductase (modulator of drug activity B)
Putative oxidoreductase {ECO:0000313|EMBL:CCY94872.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_154_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7943..9808)
DNA (1866bp) protein (622aa)
Long-chain-fatty-acid--CoA ligase n=8 Tax=Bifidobacterium longum RepID=F8ATE7_BIFLN
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEI96963.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
long-chain-fatty-acid--CoA ligase
L1_007_029G1_scaffold_154_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9928..10434)
DNA (507bp) protein (169aa)
Large-conductance mechanosensitive channel n=2 Tax=Bifidobacterium longum RepID=E8MEQ4_BIFL2
large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000313|EMBL:BAJ67181.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_154_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10602..11030)
DNA (429bp) protein (143aa)
Nucleoside 2-deoxyribosyltransferase n=14 Tax=Bifidobacterium RepID=D6DBP2_BIFLN
nucleoside 2-deoxyribosyltransferase
Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:CCY94869.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_154_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11196..11600)
DNA (405bp) protein (135aa)
Acetyltransferase n=10 Tax=Bifidobacterium RepID=B3DRI5_BIFLD
NH2-acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CCY94868.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_154_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12085..13197
DNA (1113bp) protein (371aa)
Endonuclease/Exonuclease/Phosphatase n=8 Tax=Bifidobacterium RepID=V6XZX0_BIFLN
Endonuclease/Exonuclease/phosphatase {ECO:0000313|EMBL:CCY94867.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_029G1_scaffold_154_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13213..14181)
DNA (969bp) protein (323aa)
Exopolyphosphatase n=15 Tax=Bifidobacterium RepID=B3DRI3_BIFLD
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:ACD99365.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_154_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14359..15582)
DNA (1224bp) protein (408aa)
Probable aspartate aminotransferase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MSX7_9BIFI
aspartate aminotransferase
Probable aspartate aminotransferase {ECO:0000313|EMBL:AAN25525.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_154_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15676..16731
DNA (1056bp) protein (352aa)
Oxidoreductase n=6 Tax=Bifidobacterium RepID=V6Y2F2_BIFLN
oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:AAN25524.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_154_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16762..17277)
DNA (516bp) protein (172aa)
T/G mismatch-specific endonuclease (EC:3.1.-.-)
T/G mismatch-specific endonuclease {ECO:0000313|EMBL:CBK69919.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBK69919.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
T/G mismatch-specific endonuclease n=6 Tax=Bifidobacterium RepID=D6DBP8_BIFLN
L1_007_029G1_scaffold_154_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17360..17878
DNA (519bp) protein (173aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=Q8G3M0_BIFLO
Acetyltransferases
GNAT family acetyltransferase {ECO:0000313|EMBL:KEY21586.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_154_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17851..18339)
DNA (489bp) protein (163aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DR77_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_154_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18527..22711)
DNA (4185bp) protein (1395aa)
Possible helicase n=5 Tax=Bifidobacterium longum RepID=Q8G3M2_BIFLO
helicase
Helicase {ECO:0000313|EMBL:AIW44147.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_154_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22789..23874
DNA (1086bp) protein (362aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=Q8G3M3_BIFLO
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:AIW44148.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_154_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23859..24008)
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C2GVL1_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71722.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_029G1_scaffold_154_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24108..25127
DNA (1020bp) protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=14 Tax=Bifidobacterium RepID=DAPD_BIFLO
hypothetical protein
L1_007_029G1_scaffold_154_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25341..26633)
DNA (1293bp) protein (431aa)
Citrate synthase n=15 Tax=Bifidobacterium RepID=D6ZVV1_BIFLJ
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_154_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26907..27689)
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Methionine aminopeptidase n=16 Tax=Bacteria RepID=F8ATD2_BIFLN
methionine aminopeptidase
L1_007_029G1_scaffold_154_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27879..28859)
DNA (981bp) protein (327aa)
Uncharacterized conserved protein n=14 Tax=Bacteria RepID=D6DBQ6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44152.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_154_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29036..31210
DNA (2175bp) protein (725aa)
Peptidase n=2 Tax=Bifidobacterium longum RepID=E8MVD4_BIFL1
Peptidase M13 {ECO:0000313|EMBL:KHD95693.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
peptidase
L1_007_029G1_scaffold_154_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31293..32030)
DNA (738bp) protein (246aa)
SSB3 n=9 Tax=Bifidobacterium RepID=E4R3W0_BIFLM
ssb3; ssb3
Single-strand binding family protein {ECO:0000313|EMBL:EIJ28354.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_154_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(32306..33820)
DNA (1515bp) protein (505aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Proline--tRNA ligase n=14 Tax=Bifidobacterium RepID=SYP_BIFLO
prolyl-tRNA synthase
L1_007_029G1_scaffold_154_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34432..34788
DNA (357bp) protein (119aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=C5EBK5_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY33488.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_154_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34813..36003)
DNA (1191bp) protein (397aa)
Possible pyruvate formate-lyase activating enzyme n=3 Tax=Bifidobacterium longum RepID=Q8G3N2_BIFLO
hypothetical protein
Possible pyruvate formate-lyase activating enzyme {ECO:0000313|EMBL:AAN25510.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Displaying items 1-30 of 44 in total

View Taxonomy