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L1_007_029G1_scaffold_159

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_159_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glutamine synthetase n=2 Tax=Bifidobacterium longum RepID=E8MHG3_BIFL2
Glutamine synthetase
L1_007_029G1_scaffold_159_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(388..1170)
DNA (783bp) protein (261aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C550_BIFBA
Conserved hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89200.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1235..2728)
DNA (1494bp) protein (498aa)
Dihydrolipoyl dehydrogenase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYH0_BIFBR
pdhD; Dihydrolipoamide dehydrogenase
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:AHJ20854.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_159_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2853..3473)
DNA (621bp) protein (207aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C548_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89202.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3564..4931
DNA (1368bp) protein (456aa)
Peptidase dimerization domain protein n=2 Tax=Bifidobacterium breve RepID=F6C547_BIFBA
Peptidase family M20A protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFE89203.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99660.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5239..5838
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C546_BIFBA
Permease protein of ABC transporter system, probably thiamine metabolism
Uncharacterized protein {ECO:0000313|EMBL:AEF27009.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_159_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5838..7310
DNA (1473bp) protein (491aa)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C545_BIFBA
ABC transporter ATP-binding protein
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEF27618.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_159_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7307..8245
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZWT1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74557.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
cobalt transport protein
L1_007_029G1_scaffold_159_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8282..9160
DNA (879bp) protein (293aa)
RNA methyltransferase, TrmH family n=4 Tax=Bifidobacterium breve RepID=D4BNH0_BIFBR
rRNA methylase
Putative rRNA methylase {ECO:0000313|EMBL:BAQ99664.1}; RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFE89207.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9214..10281
DNA (1068bp) protein (356aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
pheS; Phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=6 Tax=Bifidobacterium breve RepID=F9XY45_BIFBU
L1_007_029G1_scaffold_159_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10289..12898
DNA (2610bp) protein (870aa)
pheT; phenylalanine--tRNA ligase, beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C541_BIFBA
L1_007_029G1_scaffold_159_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12926..13582
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNH3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:BAQ99667.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
hypothetical protein
L1_007_029G1_scaffold_159_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13673..14773
DNA (1101bp) protein (367aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZWT7_BIFBR
N-acetyl-gamma-glutamyl-phosphate reductase
L1_007_029G1_scaffold_159_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14770..15945
DNA (1176bp) protein (392aa)
N-acetylglutamate synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002E86221
Glutamate N-acetyltransferase/Amino-acid acetyltransferase
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_159_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16174..17130
DNA (957bp) protein (319aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
acetylglutamate kinase n=1 Tax=Bifidobacterium breve RepID=UPI0002EA6CCF
Acetylglutamate kinase
L1_007_029G1_scaffold_159_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17120..18415
DNA (1296bp) protein (432aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Acetylornithine aminotransferase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C536_BIFBA
aminotransferase, acetylornithine/succinylornithine family
L1_007_029G1_scaffold_159_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18444..19409
DNA (966bp) protein (322aa)
argF; Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Ornithine carbamoyltransferase, catabolic n=6 Tax=Bifidobacterium breve RepID=F6C535_BIFBA
L1_007_029G1_scaffold_159_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19406..19918
DNA (513bp) protein (171aa)
Arginine repressor n=5 Tax=Bifidobacterium breve RepID=F6CAB0_BIFBA
Arginine repressor, argR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_159_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20073..21311
DNA (1239bp) protein (413aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Argininosuccinate synthase n=5 Tax=Bifidobacterium breve RepID=F6CAA9_BIFBA
Argininosuccinate synthase
L1_007_029G1_scaffold_159_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21621..23204
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNI2_BIFBR
IS3 family transposase
IS3 family transposase {ECO:0000313|EMBL:AHJ20871.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_159_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23375..23650)
DNA (276bp) protein (92aa)
Addiction module toxin, Txe/YoeB family n=4 Tax=Bifidobacterium breve RepID=F6CAA7_BIFBA
Addiction module toxin, Txe/YoeB family
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:EFE89221.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99676.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23652..23906)
DNA (255bp) protein (85aa)
Addiction module antitoxin, RelB/DinJ family n=4 Tax=Bifidobacterium breve RepID=F6CAA6_BIFBA
Hypothetical protein with RelB antitoxin domain
Uncharacterized protein {ECO:0000313|EMBL:AHJ20873.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_159_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24135..25607
DNA (1473bp) protein (491aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Argininosuccinate lyase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNI7_BIFBR
Argininosuccinate lyase
L1_007_029G1_scaffold_159_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26045..26239
DNA (195bp) protein (65aa)
ThiS protein n=5 Tax=Bifidobacterium breve RepID=F9XY58_BIFBU
ThiS protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EPD74570.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_159_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26251..27120
DNA (870bp) protein (290aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Thiazole synthase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CAA4_BIFBA
thiG; thiazole biosynthesis protein ThiG
L1_007_029G1_scaffold_159_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27259..28068
DNA (810bp) protein (270aa)
Thiazole biosynthesis adenylyltransferase ThiF n=2 Tax=Bifidobacterium breve RepID=D4BNJ0_BIFBR
ThiF protein
Thiamine biosynthesis protein {ECO:0000313|EMBL:BAQ99682.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28214..28570
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6CAA2_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26958.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_159_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28840..29373
DNA (534bp) protein (178aa)
Putative HD domain protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYE7_BIFBR
Hydrolase (HAD superfamily)
HD domain protein {ECO:0000313|EMBL:AEF27797.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_159_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29383..30150
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNJ4_BIFBR
Transporter
Uncharacterized protein {ECO:0000313|EMBL:EFE89231.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_159_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30171..30878)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6CA99_BIFBA
Transporter
Transporter {ECO:0000313|EMBL:AHJ20881.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying items 1-30 of 31 in total

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