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L1_007_029G1_scaffold_170

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_170_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..850
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHG2_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75861.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_170_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1630..3036
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002DC83D4
DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
L1_007_029G1_scaffold_170_3
unknown

Not on your lists

3108..4487
DNA (1380bp) protein (460aa)
hypothetical protein
L1_007_029G1_scaffold_170_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4491..6155)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHM4_BIFBR
TraG/TraD family
Uncharacterized protein {ECO:0000313|EMBL:EPD75864.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_170_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6152..6532)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C6U2_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27604.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_170_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6529..6849)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXU9_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96209.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6839..7987)
DNA (1149bp) protein (383aa)
antirestriction protein n=1 Tax=Bifidobacterium breve RepID=UPI00030371E6
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96210.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7990..8994)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGI7_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75868.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_170_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9022..9891)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXV4_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96214.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9960..11390)
DNA (1431bp) protein (477aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6U9_BIFBA
Relaxase
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:AEF27673.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_170_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11381..11785)
DNA (405bp) protein (135aa)
Bacterial mobilization protein MobC n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6V0_BIFBA
mobilization protein
Bacterial mobilization protein MobC {ECO:0000313|EMBL:AEF26374.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_170_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12078..12446
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3A109_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ80228.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12480..12806
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C6V2_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75873.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_170_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12891..14465)
DNA (1575bp) protein (525aa)
Chromosome partitioning protein parB n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXV9_BIFBU
parB1; Chromosome partitioning protein parB
Chromosome partitioning protein parB {ECO:0000313|EMBL:ABE96217.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14558..15166)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C729_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28129.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_170_16
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15730..16395)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHH6_BIFBR
Nucleotidyltransferase domain-containing protein {ECO:0000313|EMBL:KFI63076.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
putative nucleotidyltransferase domain protein
L1_007_029G1_scaffold_170_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16520..17884)
DNA (1365bp) protein (455aa)
Integrase protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW1_BIFBU
Integrase protein
Integrase protein {ECO:0000313|EMBL:ABE96219.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_18
unknown

Not on your lists

18159..18416
DNA (258bp) protein (86aa)
hypothetical protein
L1_007_029G1_scaffold_170_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18291..18554)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C730_BIFBA
site-specific recombinase, phage integrase domain protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27883.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_170_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19055..20536)
DNA (1482bp) protein (494aa)
Galactoside symporter n=2 Tax=Bifidobacterium breve RepID=F9XXW3_BIFBU
lacS; Galactoside symporter
Galactoside symporter {ECO:0000313|EMBL:AHJ21744.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_170_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20902..24039
DNA (3138bp) protein (1046aa)
lacZ6; Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Beta-galactosidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW4_BIFBU
L1_007_029G1_scaffold_170_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24239..25249)
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium breve RepID=F9XXW5_BIFBU
Transcriptional regulator, LacI family
Uncharacterized protein {ECO:0000313|EMBL:EPD75881.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_170_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25330..25578)
DNA (249bp) protein (83aa)
ISMsm8, transposase n=2 Tax=Bifidobacterium breve RepID=H3L1W6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75882.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Transposase
L1_007_029G1_scaffold_170_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25755..26924)
DNA (1170bp) protein (390aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CJE6_BIFBR
Solute-binding protein of ABC transporter system (lactose)
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI84660.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_170_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27311..28486
DNA (1176bp) protein (392aa)
NagC/XylR-type transciptional regulator n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW7_BIFBU
NagC/XylR-type transciptional regulator
NagC/XylR-type transciptional regulator {ECO:0000313|EMBL:ABE96226.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_170_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28483..28641)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI000364FB54
Uncharacterized protein {ECO:0000313|EMBL:ERI84662.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_170_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28734..30755
DNA (2022bp) protein (674aa)
nagZ; Beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ABE96227.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ABE96227.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Beta-N-acetylhexosaminidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW8_BIFBU
L1_007_029G1_scaffold_170_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30927..31130)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CJF1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI84665.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_029G1_scaffold_170_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31394..31738
DNA (345bp) protein (115aa)
Permease protein of ABC transporter system n=7 Tax=Bifidobacterium bifidum RepID=E3EQG5_BIFBS
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:ADG99885.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Displaying 29 items

View Taxonomy