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L1_007_029G1_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_227_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1107)
DNA (1107bp) protein (369aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Polyphosphate kinase n=4 Tax=Bifidobacterium breve RepID=F6C8D8_BIFBA
Polyphosphate kinase
L1_007_029G1_scaffold_227_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1657..3000
DNA (1344bp) protein (448aa)
ser/threonine protein phosphatase n=1 Tax=Bifidobacterium breve RepID=UPI00030B9A41
Phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:BAR00812.1}; Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFE88404.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_227_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3134..3943)
DNA (810bp) protein (270aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8D5_BIFBA
IclR family transcriptional regulator
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:AEF26606.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_227_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4139..5542
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
3-isopropylmalate dehydratase large subunit n=4 Tax=Bifidobacterium breve RepID=F6C8D4_BIFBA
leuC; 3-isopropylmalate dehydratase large subunit
L1_007_029G1_scaffold_227_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5690..6379
DNA (690bp) protein (230aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
3-isopropylmalate dehydratase small subunit n=4 Tax=Bifidobacterium breve RepID=D4BQB2_BIFBR
3-isopropylmalate dehydratase small subunit
L1_007_029G1_scaffold_227_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7314..7817
DNA (504bp) protein (168aa)
Hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ50_BIFBU
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20098.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_029G1_scaffold_227_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7880..9043
DNA (1164bp) protein (388aa)
Dihydroorotate oxidase {ECO:0000313|EMBL:EFE88411.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EFE88411.1};; Putative dihydroorotate dehydrogenase {ECO:0000313|EMBL:BAR00806.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Dihydroorotate oxidase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQB6_BIFBR
Dihydroorotate dehydrogenase
L1_007_029G1_scaffold_227_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9165..9914)
DNA (750bp) protein (250aa)
ATP-binding protein of ABC transporter system for amino acids n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ48_BIFBU
ATP-binding protein of ABC transporter system for amino acids
ATP-binding protein of ABC transporter system for amino acids {ECO:0000313|EMBL:ABE96428.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_227_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9969..10523)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C8C8_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21958.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10613..11398)
DNA (786bp) protein (262aa)
Amino acid ABC transporter, amino acid-binding protein/permease protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0X8_BIFBR
Permease protein of ABC transporter system for amino acids
ABC transporter, permease protein {ECO:0000313|EMBL:EFE88414.1}; Putative ABC transporter permease component {ECO:0000313|EMBL:BAR00803.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_227_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11403..12092)
DNA (690bp) protein (230aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C852_BIFBA
Permease protein of ABC transporter system for amino acids
ABC transporter, permease protein {ECO:0000313|EMBL:AEF26631.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_227_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12144..12995)
DNA (852bp) protein (284aa)
ABC transporter, substrate-binding protein, family 3 n=4 Tax=Bifidobacterium breve RepID=F6C851_BIFBA
Solute binding protein of ABC transporter system for amino acids
Solute binding protein of ABC transporter system for amino acids {ECO:0000313|EMBL:AHJ21955.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13435..14781)
DNA (1347bp) protein (449aa)
NADH oxidase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0X5_BIFBR
NADH oxidase H2O-forming
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFE88417.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_227_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15075..16400
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C849_BIFBA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L1_007_029G1_scaffold_227_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16449..17717)
DNA (1269bp) protein (423aa)
Member of MFS, possible Macrolide-efflux protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYW2_BIFBU
member of MFS, possible Macrolide-efflux protein
Member of MFS, possible Macrolide-efflux protein {ECO:0000313|EMBL:ABE96421.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_227_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17714..18421)
DNA (708bp) protein (236aa)
Transcriptional regulator, TetR family n=5 Tax=Bifidobacterium breve RepID=F6C847_BIFBA
Transcriptional regulator, TetR family
Uncharacterized protein {ECO:0000313|EMBL:EPD76098.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_227_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18629..20491
DNA (1863bp) protein (621aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Arginine--tRNA ligase n=2 Tax=Bifidobacterium breve RepID=S3A1N0_BIFBR
Arginyl-tRNA synthetase
L1_007_029G1_scaffold_227_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20488..22116
DNA (1629bp) protein (543aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Diaminopimelate decarboxylase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQC8_BIFBR
Diaminopimelate decarboxylase
L1_007_029G1_scaffold_227_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22211..22714)
DNA (504bp) protein (168aa)
PTS N-acetylglucosamine transporter subunit IIABC n=1 Tax=Bifidobacterium breve RepID=UPI000377BC57
PTS system, glucose-specific IIABC component
PTS system, glucose-specific IIABC component {ECO:0000313|EMBL:AHJ21948.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22711..23205)
DNA (495bp) protein (165aa)
PTS system, glucose-like IIB component n=4 Tax=Bifidobacterium breve RepID=D4BQD0_BIFBR
PTS system, N-acetylglucosamine-specific IIBC component
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EPD76094.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_227_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23399..24715
DNA (1317bp) protein (439aa)
thrA; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYV8_BIFBU
L1_007_029G1_scaffold_227_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24795..25949
DNA (1155bp) protein (385aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Homoserine kinase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A1M3_BIFBR
Homoserine kinase
L1_007_029G1_scaffold_227_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26101..27552
DNA (1452bp) protein (484aa)
Maf protein n=2 Tax=Bifidobacterium breve RepID=F9XYV6_BIFBU
Maf protein
Septum formation protein Maf {ECO:0000313|EMBL:EFE88428.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00790.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_227_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27615..28124)
DNA (510bp) protein (170aa)
Toxin-antitoxin system, toxin component, GNAT family n=5 Tax=Bifidobacterium breve RepID=F6C841_BIFBA
Acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AHJ21943.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28115..28450)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AIB1_BIFBR
Hypothetical protein
Toxin-antitoxin system protein {ECO:0000313|EMBL:AHJ21942.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28716..29396
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C839_BIFBA
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEF26363.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_227_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29428..30681
DNA (1254bp) protein (418aa)
Efflux ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C838_BIFBA
Transporter
Transporter {ECO:0000313|EMBL:AHJ21940.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30667..31695)
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C837_BIFBA
putative HTH-type transcriptional repressor PurR
Sugar-binding domain protein {ECO:0000313|EMBL:AEF27126.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_227_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31907..33190
DNA (1284bp) protein (428aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=5 Tax=Bifidobacterium breve RepID=F6C836_BIFBA
Mandelate racemase
Mandelate racemase {ECO:0000313|EMBL:AHJ21938.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_227_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33331..34122
DNA (792bp) protein (264aa)
Short chain dehydrogenase n=7 Tax=Bifidobacterium RepID=F9XYV0_BIFBU
KR domain-containing protein
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFE88435.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Displaying items 1-30 of 46 in total

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