ggKbase home page

L1_007_029G1_scaffold_246

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_246_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7TAG6_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS54136.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L1_007_029G1_scaffold_246_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(104..1270)
DNA (1167bp) protein (389aa)
Predicted permease n=12 Tax=Lactobacillus rhamnosus RepID=B5QJD2_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73386.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1716..1910
DNA (195bp) protein (65aa)
Conserved protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TAG8_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86611.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41220.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L1_007_029G1_scaffold_246_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2305..2931
DNA (627bp) protein (209aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
LexA repressor n=5 Tax=Lactobacillus rhamnosus RepID=C7TH65_LACRL
lexA; repressor LexA
L1_007_029G1_scaffold_246_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3052..3525)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A3G9_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73390.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3536..4483)
DNA (948bp) protein (316aa)
Auxin efflux carrier (AEC) family permease n=11 Tax=Lactobacillus rhamnosus RepID=B5QJS7_LACRH
membrane transport family protein
Malate permease {ECO:0000313|EMBL:AGP73391.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4505..5122)
DNA (618bp) protein (206aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH68_LACRL
flavin reductase like domain protein
Nitrilotriacetate monooxygenase component B {ECO:0000313|EMBL:AGP73392.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5421..6380)
DNA (960bp) protein (320aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH69_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN78862.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_246_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6546..7118)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
5-formyltetrahydrofolate cyclo-ligase n=6 Tax=Lactobacillus rhamnosus RepID=C7TAH4_LACRG
5-formyltetrahydrofolate cyclo-ligase
L1_007_029G1_scaffold_246_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7126..7476)
DNA (351bp) protein (117aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TH71_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73395.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7567..8502
DNA (936bp) protein (312aa)
Mg2 and Co2 transporter n=5 Tax=Lactobacillus rhamnosus RepID=C7TH72_LACRL
corA-like Mg2+ transporter family protein
Magnesium transporter CorA {ECO:0000313|EMBL:KIC97425.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_246_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8627..9505)
DNA (879bp) protein (293aa)
Malolactic regulator, LysR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TH73_LACRL
mleR; LysR family transcriptional regulator
Malolactic regulator {ECO:0000313|EMBL:AGP73397.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9928..11595
DNA (1668bp) protein (556aa)
Malic enzyme n=6 Tax=Lactobacillus rhamnosus RepID=C7TH74_LACRL
Malolactic enzyme {ECO:0000313|EMBL:AGP73399.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
sfcA; malate dehydrogenase
L1_007_029G1_scaffold_246_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11600..12586
DNA (987bp) protein (329aa)
Malate permease n=9 Tax=Lactobacillus rhamnosus RepID=B5QJR9_LACRH
mleP; malate permease
Malate permease {ECO:0000313|EMBL:AGP73400.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12644..13141)
DNA (498bp) protein (166aa)
Thiol peroxidase n=8 Tax=Lactobacillus rhamnosus RepID=C7TH76_LACRL
ahpC/TSA family protein
Thiol peroxidase {ECO:0000313|EMBL:KIC97429.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_246_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13444..14004
DNA (561bp) protein (187aa)
Conserved protein n=10 Tax=Lactobacillus rhamnosus RepID=C7TH77_LACRL
Uncharacterized protein {ECO:0000313|EMBL:EEN78834.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
flavodoxin domain protein
L1_007_029G1_scaffold_246_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14161..15135)
DNA (975bp) protein (325aa)
Transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein n=3 Tax=Lactobacillus rhamnosus RepID=G7V465_LACRH
transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein
Transcriptional regulator {ECO:0000313|EMBL:KIC97431.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_246_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15250..16842
DNA (1593bp) protein (531aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Lactobacillus rhamnosus RepID=UPI0002F72E7E
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC97432.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
multidrug ABC transporter ATPase and permease
L1_007_029G1_scaffold_246_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16928..18742)
DNA (1815bp) protein (605aa)
Oligoendopeptidase F n=2 Tax=Lactobacillus rhamnosus RepID=C7TH80_LACRL
Oligoendopeptidase F {ECO:0000313|EMBL:AGP73405.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
pepF; oligoendopeptidase F
L1_007_029G1_scaffold_246_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19080..19526
DNA (447bp) protein (149aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Nucleoside diphosphate kinase n=9 Tax=Lactobacillus rhamnosus RepID=C7TAI5_LACRG
ndk; nucleoside diphosphate kinase
L1_007_029G1_scaffold_246_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19673..20002)
DNA (330bp) protein (110aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TH82_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73407.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20083..22431)
DNA (2349bp) protein (783aa)
Cation-transporting ATPase n=2 Tax=Lactobacillus rhamnosus RepID=C7TH83_LACRL
ctpE; cation-transporting ATPase
Cation-transporting ATPase {ECO:0000313|EMBL:AGP73408.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22598..23521
DNA (924bp) protein (308aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Proline iminopeptidase n=3 Tax=Lactobacillus rhamnosus RepID=C7TH84_LACRL
pepR; prolyl aminopeptidase
L1_007_029G1_scaffold_246_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23574..23921
DNA (348bp) protein (116aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TAI9_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS54160.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L1_007_029G1_scaffold_246_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24058..24855
DNA (798bp) protein (266aa)
GNAT family acetyltransferase n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2HFQ2_LACRH
wecD; acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGP73411.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24880..26034
DNA (1155bp) protein (385aa)
Na /H antiporter n=3 Tax=Lactobacillus rhamnosus RepID=C7TH87_LACRL
napA; Na/H antiporter
Na(+)/H(+) antiporter {ECO:0000313|EMBL:AGP73412.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_246_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26291..26923
DNA (633bp) protein (211aa)
Hydrolase, haloacid dehalogenase-like family n=3 Tax=Lactobacillus rhamnosus RepID=C7TH89_LACRL
gph; haloacid dehalogenase-like family hydrolase
Phosphoglycolate phosphatase {ECO:0000313|EMBL:AGP73413.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying 27 items

View Taxonomy