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L1_007_029G1_scaffold_249

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_249_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3..827
DNA (825bp) protein (275aa)
Transcriptional regulator, xre family n=5 Tax=Lactobacillus rhamnosus RepID=C7TLR2_LACRL
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC97253.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_249_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1375..2250)
DNA (876bp) protein (292aa)
ABC transporter, ATPase component n=5 Tax=Lactobacillus rhamnosus RepID=C7TLR4_LACRL
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN79731.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_249_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2244..3482)
DNA (1239bp) protein (413aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLR5_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74997.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3472..4587)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=S5A789_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC97257.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_249_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5099..5782)
DNA (684bp) protein (228aa)
NADP oxidoreductase coenzyme F420-dependent family protein n=3 Tax=Lactobacillus rhamnosus RepID=G7UXY4_LACRH
NADP oxidoreductase coenzyme F420-dependent family protein
Putative dinucleotide-binding enzyme {ECO:0000313|EMBL:AGP75000.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5782..6837)
DNA (1056bp) protein (352aa)
Oxidoreductase, LLM family {ECO:0000313|EMBL:EEN79726.1}; EC=1.-.-.- {ECO:0000313|EMBL:EEN79726.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Monooxygenase n=4 Tax=Lactobacillus rhamnosus RepID=G7UXY5_LACRH
monooxygenase
L1_007_029G1_scaffold_249_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7066..7605)
DNA (540bp) protein (180aa)
PIN domain containing protein n=9 Tax=Lactobacillus rhamnosus RepID=B5QNX2_LACRH
hypothetical protein
DNA-binding protein {ECO:0000313|EMBL:KIC97260.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_249_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7606..8388)
DNA (783bp) protein (261aa)
TrmH family tRNA/rRNA methyltransferase YacO {ECO:0000313|EMBL:EKS50477.1}; EC=2.1.1.- {ECO:0000313|EMBL:EKS50477.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
RNA methyltransferase, TrmH family, group 3 n=7 Tax=Lactobacillus rhamnosus RepID=C7TLS2_LACRL
rlmB; TrmH family group 3 RNA methyltransferase
L1_007_029G1_scaffold_249_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8360..8788)
DNA (429bp) protein (143aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Mini-ribonuclease 3 n=5 Tax=Lactobacillus rhamnosus RepID=C7TLS3_LACRL
RNase3 domain-containing protein
L1_007_029G1_scaffold_249_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8785..10191)
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteine--tRNA ligase; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Cysteine--tRNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=C7TLS4_LACRL
cysS; cysteine--tRNA ligase
L1_007_029G1_scaffold_249_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10328..11722)
DNA (1395bp) protein (465aa)
(S)-2-hydroxy-acid oxidase chain D (EC 1.1.3.15) n=5 Tax=Lactobacillus rhamnosus RepID=C7TLS5_LACRL
FAD linked oxidase, C-terminal domain-containing protein
FAD-binding protein {ECO:0000313|EMBL:KIC96853.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_249_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11845..12414)
DNA (570bp) protein (190aa)
Conserved protein n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7TLS6_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79720.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_249_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12690..12800)
DNA (111bp) protein (37aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TLS7_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79719.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_249_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13047..14540)
DNA (1494bp) protein (498aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Glutamate--tRNA ligase n=9 Tax=Lactobacillus rhamnosus RepID=B5QNW3_LACRH
gltX; glutamate--tRNA ligase
L1_007_029G1_scaffold_249_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15091..15921)
DNA (831bp) protein (277aa)
Conserved membrane protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLS9_LACRL
membrane protein
Putative membrane protein {ECO:0000313|EMBL:AGP75009.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15935..16951)
DNA (1017bp) protein (339aa)
Conserved membrane protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TLT0_LACRL
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75010.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16948..17334)
DNA (387bp) protein (129aa)
Predicted transcriptional regulator n=9 Tax=Lactobacillus rhamnosus RepID=B5QNV9_LACRH
bacterial regulatory s, gntR family protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGP75011.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17466..19094)
DNA (1629bp) protein (543aa)
ABC transporter, multidrug transporter ATPase and permease component n=4 Tax=Lactobacillus rhamnosus RepID=C7TLT2_LACRL
multidrug ABC transporter ATPase and permease
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:AGP75012.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19594..20910)
DNA (1317bp) protein (439aa)
Internalin J n=5 Tax=Lactobacillus rhamnosus RepID=C7TLT3_LACRL
LPXTG-motif cell wall anchor domain-containing protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:AGP75013.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21195..21953)
DNA (759bp) protein (253aa)
ABC transporter, permease protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TLT4_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75014.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21955..22860)
DNA (906bp) protein (302aa)
ABC transporter, ATPase component n=8 Tax=Lactobacillus rhamnosus RepID=C7TLT5_LACRL
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN79710.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_249_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23002..23898
DNA (897bp) protein (299aa)
Transcriptional regulator, xre family n=8 Tax=Lactobacillus rhamnosus RepID=C7TLT6_LACRL
transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein
Positive transcriptional regulator MutR family {ECO:0000313|EMBL:AGP75016.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23990..25105)
DNA (1116bp) protein (372aa)
Integral membrane protein, PIN and TRAM domains n=8 Tax=Lactobacillus rhamnosus RepID=B5QNV7_LACRH
hypothetical protein
PIN/TRAM domain protein, Pili retraction protein pilT {ECO:0000313|EMBL:CAR88234.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42777.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L1_007_029G1_scaffold_249_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25126..26490)
DNA (1365bp) protein (455aa)
DNA repair protein radA n=8 Tax=Lactobacillus rhamnosus RepID=B5QNV6_LACRH
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_249_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26510..26662)
DNA (153bp) protein (51aa)
DUTPase n=8 Tax=Lactobacillus rhamnosus RepID=B5QNV5_LACRH
putative dUTPase
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:AGP75019.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying 25 items

View Taxonomy