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L1_007_029G1_scaffold_260

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_260_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112..600
DNA (489bp) protein (163aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum subsp. longum RepID=I3ASG7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ22084.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_260_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1027..6927
DNA (5901bp) protein (1967aa)
Endo-alpha-N-acetylgalactosaminidase n=6 Tax=Bifidobacterium longum RepID=I3ASG9_BIFLN
Endo-alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:EIJ22087.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
serine protease
L1_007_029G1_scaffold_260_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7026..7847)
DNA (822bp) protein (274aa)
Predicted membrane protein n=8 Tax=Bifidobacterium RepID=D6DAK0_BIFLN
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:ESV32791.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_029G1_scaffold_260_4
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8074..8187
DNA (114bp) protein (38aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=B3DU82_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95232.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_260_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9291..11102
DNA (1812bp) protein (604aa)
Widely conserved hypothetical membrane protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G718_BIFLO
hypothetical protein
Widely conserved hypothetical membrane protein {ECO:0000313|EMBL:AAN24291.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_260_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11276..11959
DNA (684bp) protein (228aa)
Fe2+ high-affinity transport protein n=16 Tax=Bifidobacterium RepID=B3DU80_BIFLD
hypothetical protein
Fe2+ high-affinity transport protein {ECO:0000313|EMBL:ACD98699.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_260_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12109..13377
DNA (1269bp) protein (423aa)
Conserved hypothetical membrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXP4_BIFLJ
Membrane protein, PF10080 family {ECO:0000313|EMBL:KFI72905.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
membrane protein
L1_007_029G1_scaffold_260_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13399..14703
DNA (1305bp) protein (435aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXP5_BIFLJ
ABC transporter permease {ECO:0000313|EMBL:KFI72904.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L1_007_029G1_scaffold_260_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14737..15960
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXP6_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG99692.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_029G1_scaffold_260_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15976..16773
DNA (798bp) protein (266aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:CEF07588.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEF07588.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
ABC transporter ATP-binding component n=3 Tax=Bifidobacterium longum RepID=B7GTA7_BIFLS
ABC transporter
L1_007_029G1_scaffold_260_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16888..17451
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B7GTA8_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51331.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_029G1_scaffold_260_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17457..18056)
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXP9_BIFLJ
AcrR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADG99695.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_029G1_scaffold_260_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18171..20333)
DNA (2163bp) protein (721aa)
Conserved hypothetical membrane protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTB0_BIFLS
YhgE/Pip domain-containing protein {ECO:0000313|EMBL:KFI72899.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L1_007_029G1_scaffold_260_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20330..22960)
DNA (2631bp) protein (877aa)
Hypothetical membrane protein with similarity to phage infection protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDJ0_9BIFI
Hypothetical membrane protein with similarity to phage infection protein {ECO:0000313|EMBL:CCY95242.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_029G1_scaffold_260_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23315..24601
DNA (1287bp) protein (429aa)
Putative membrane protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XU88_BIFLN
Putative membrane protein {ECO:0000313|EMBL:ESV32802.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Predicted membrane protein
L1_007_029G1_scaffold_260_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24780..26234
DNA (1455bp) protein (485aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
6-phosphogluconate dehydrogenase (decarboxylating) (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Bifidobacterium longum E18 RepID=V6XUF2_BIFLN
L1_007_029G1_scaffold_260_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26406..27248)
DNA (843bp) protein (281aa)
Glucosamine-6-phosphate isomerase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU13_BIFLN
magB; glucosamine-6-phosphate isomerase
6-phosphogluconolactonase {ECO:0000313|EMBL:KHD94619.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_029G1_scaffold_260_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27500..28525)
DNA (1026bp) protein (342aa)
Glucose-6-phosphate dehydrogenase assembly protein OpcA n=12 Tax=Bacteria RepID=D6DAI6_BIFLN
glucose-6-p dehydrogenase subunit
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase {ECO:0000313|EMBL:ESV32805.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_029G1_scaffold_260_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28522..30060)
DNA (1539bp) protein (513aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glucose-6-phosphate 1-dehydrogenase n=11 Tax=Bifidobacterium RepID=Q8G732_BIFLO
zwf; zwf
L1_007_029G1_scaffold_260_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30384..32018
DNA (1635bp) protein (545aa)
Dipeptidase (EC:3.4.-.-)
Dipeptidase n=8 Tax=Bifidobacterium RepID=Q8G733_BIFLO
Peptidase C69 {ECO:0000313|EMBL:KEY23561.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_260_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32092..33126)
DNA (1035bp) protein (345aa)
Glycosyltransferase n=3 Tax=Bifidobacterium RepID=F8ATS9_BIFLN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAP82846.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_029G1_scaffold_260_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33150..33971)
DNA (822bp) protein (274aa)
AcrR-type transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DU64_BIFLD
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CBK71185.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_029G1_scaffold_260_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34085..35356
DNA (1272bp) protein (424aa)
Signal recognition particle receptor FtsY n=10 Tax=Bifidobacterium RepID=E8MGG4_BIFL2
signal recognition particle-docking protein
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_260_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35724..36884
DNA (1161bp) protein (387aa)
Possible ammonium ion transporter n=4 Tax=Bifidobacterium longum RepID=Q8G737_BIFLO
amtP; ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Displaying 24 items

View Taxonomy