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L1_007_029G1_scaffold_270

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_270_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..1607)
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
CTP synthase n=11 Tax=Lactobacillus rhamnosus RepID=B5QPL9_LACRH
CTP synthase
L1_007_029G1_scaffold_270_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2038..3225
DNA (1188bp) protein (396aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UZR8_LACRH
pyridine nucleotide-disulfide oxidoreductase family protein
NADH dehydrogenase {ECO:0000313|EMBL:AGP75237.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3326..3670)
DNA (345bp) protein (115aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMG1_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81104.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_270_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3710..4066)
DNA (357bp) protein (119aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMG2_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81103.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_270_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4317..5192)
DNA (876bp) protein (292aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMG3_LACRL
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:AGP75240.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5420..6100)
DNA (681bp) protein (227aa)
Probable DNA-directed RNA polymerase subunit delta n=3 Tax=Lactobacillus rhamnosus RepID=S5A4V1_LACRH
DNA-directed RNA polymerase delta subunit
Probable DNA-directed RNA polymerase subunit delta {ECO:0000256|HAMAP-Rule:MF_00357, ECO:0000256|SAAS:SAAS00194236}; RNAP delta factor {ECO:0000256|HAMAP-Rule:MF_00357}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6144..6590)
DNA (447bp) protein (149aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7T7B0_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75242.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7003..7851
DNA (849bp) protein (283aa)
Lipoate-protein ligase A n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A7K5_LACRH
Lipoate-protein ligase A
Lipoate-protein ligase A {ECO:0000313|EMBL:AGP75243.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7841..9193
DNA (1353bp) protein (451aa)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:EKS49825.1}; EC=3.1.5.1 {ECO:0000313|EMBL:EKS49825.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
HD superfamily phosphohydrolases n=7 Tax=Lactobacillus rhamnosus RepID=C7TMG8_LACRL
ywfO; HD superfamily phosphohydrolases
L1_007_029G1_scaffold_270_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9205..9657)
DNA (453bp) protein (151aa)
NUDIX family hydrolase n=9 Tax=Lactobacillus rhamnosus RepID=B5QM19_LACRH
hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:KIC98076.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_270_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9729..10787
DNA (1059bp) protein (353aa)
Conserved domain protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TMH0_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75246.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10844..11230
DNA (387bp) protein (129aa)
Large-conductance mechanosensitive channel n=10 Tax=Lactobacillus rhamnosus RepID=C7TMH1_LACRL
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
mscL; large conductance mechanosensitive channel protein
L1_007_029G1_scaffold_270_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11382..11816)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2I3S5_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75248.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11905..12234)
DNA (330bp) protein (110aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TMH3_LACRL
Hypothetical protein
ASCH domain protein {ECO:0000313|EMBL:EEN81117.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_270_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12331..13305)
DNA (975bp) protein (325aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Ribose-phosphate pyrophosphokinase n=11 Tax=Lactobacillus rhamnosus RepID=C7T7B9_LACRG
prs; ribose-phosphate pyrophosphokinase
L1_007_029G1_scaffold_270_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13403..14791)
DNA (1389bp) protein (463aa)
Bifunctional protein GlmU n=3 Tax=Lactobacillus rhamnosus RepID=G7V014_LACRH
N-acetylglucosamine-1-phosphate uridyltransferase/Glucosamine-1-phosphate N-acetyltransferase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15125..16330)
DNA (1206bp) protein (402aa)
Glycopeptide antibiotics resistance protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TMH7_LACRL
RDD family protein
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:AGP75253.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16327..17175)
DNA (849bp) protein (283aa)
Purine operon repressor n=8 Tax=Lactobacillus rhamnosus RepID=B5QM10_LACRH
purR; pur operon repressor
PurR: transcription regulator associated with purine metabolism {ECO:0000313|EMBL:AGP75254.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17397..18047
DNA (651bp) protein (217aa)
ABC-type uncharacterized transport system, ATPase component n=12 Tax=Lactobacillus rhamnosus RepID=B5QM09_LACRH
ybbL; ABC transporter ATP-binding protein
YbbL ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP75255.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18044..18805
DNA (762bp) protein (254aa)
ABC transporter, permease protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TMI0_LACRL
YbbM seven transmembrane helix protein
Membrane protein {ECO:0000313|EMBL:KIC98086.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_270_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18898..19767)
DNA (870bp) protein (290aa)
Cobalt-zinc-cadmium resistance protein CzcD n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5AEM3_LACRH
Cobalt-zinc-cadmium resistance protein CzcD
Cobalt-zinc-cadmium resistance protein CzcD {ECO:0000313|EMBL:AGP75257.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19823..20701)
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=5 Tax=Lactobacillus rhamnosus RepID=C7TMI2_LACRL
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L1_007_029G1_scaffold_270_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20951..21202)
DNA (252bp) protein (84aa)
Uncharacterized protein n=13 Tax=Lactobacillus rhamnosus RepID=C7T7C7_LACRG
veg; VEG protein homologue
Uncharacterized protein {ECO:0000313|EMBL:KIC98089.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_270_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21760..22644)
DNA (885bp) protein (295aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Ribosomal RNA small subunit methyltransferase A n=5 Tax=Lactobacillus rhamnosus RepID=C7TMI4_LACRL
ksgA; dimethyladenosine transferase
L1_007_029G1_scaffold_270_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22637..23206)
DNA (570bp) protein (190aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Ribonuclease M5 n=5 Tax=Lactobacillus rhamnosus RepID=C7TMI5_LACRL
rnmV; ribonuclease M5
L1_007_029G1_scaffold_270_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23203..23982)
DNA (780bp) protein (260aa)
Mg-dependent Dnase, TatD family n=4 Tax=Lactobacillus rhamnosus RepID=C7TMI6_LACRL
TatD family hydrolase
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:AGP75263.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23989..24480)
DNA (492bp) protein (164aa)
PTS system, galactitol-specific IIA component n=3 Tax=Lactobacillus rhamnosus RepID=C7TMI7_LACRL
phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein
PTS system, galactose-specific IIA component {ECO:0000313|EMBL:AGP75264.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_270_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24695..25594
DNA (900bp) protein (300aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_00734};; D-tagatose-1,6-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Tagatose 1,6-diphosphate aldolase n=9 Tax=Lactobacillus rhamnosus RepID=C7TMI8_LACRL
deoC/LacD aldolase family protein
Displaying 28 items

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