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L1_007_029G1_scaffold_284

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_284_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

468..1013
DNA (546bp) protein (182aa)
Bacterial regulatory s, luxR family protein n=3 Tax=Lactobacillus rhamnosus RepID=G7V3Z2_LACRH
bacterial regulatory s, luxR family protein
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein {ECO:0000313|EMBL:AGP73164.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1130..1282
DNA (153bp) protein (51aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7T9T7_LACRG
yvrJ family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73165.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1294..2058
DNA (765bp) protein (255aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) (GH25) n=5 Tax=Lactobacillus rhamnosus RepID=C7TGI1_LACRL
lyzozyme M1
L1_007_029G1_scaffold_284_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2283..2786
DNA (504bp) protein (168aa)
Transcriptional regulator, TetR family n=5 Tax=Lactobacillus rhamnosus RepID=C7TGI2_LACRL
bacterial regulatory s, tetR family protein
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC96792.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_284_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2791..3852
DNA (1062bp) protein (354aa)
ABC transporter, antimicrobial peptide transporter permease component n=4 Tax=Lactobacillus rhamnosus RepID=C7TGI3_LACRL
antimicrobial peptide ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KIC96791.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_284_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3857..4546
DNA (690bp) protein (230aa)
ABC transporter ATP-binding protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A144_LACRH
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP73169.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4713..6083)
DNA (1371bp) protein (457aa)
NADH peroxidase n=6 Tax=Lactobacillus rhamnosus RepID=C7TGI5_LACRL
npr; NADH peroxidase
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:KIC96789.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_284_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6331..7149)
DNA (819bp) protein (273aa)
Hydrolase of the HAD superfamily n=4 Tax=Lactobacillus rhamnosus RepID=C7TGI6_LACRL
HAD superfamily hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:EEN79128.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_284_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7272..7544)
DNA (273bp) protein (91aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7T9U5_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73172.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7783..8790
DNA (1008bp) protein (336aa)
Bacterial regulatory s, lacI family protein n=6 Tax=Lactobacillus rhamnosus RepID=G7V401_LACRH
bacterial regulatory s, lacI family protein
Sugar-binding transcriptional regulator, LacI family {ECO:0000313|EMBL:EKS53928.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L1_007_029G1_scaffold_284_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8844..9335
DNA (492bp) protein (164aa)
PTS system, IIB component n=4 Tax=Lactobacillus rhamnosus RepID=C7TGI9_LACRL
PTS system sorbose subIIB component family protein
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EEN79132.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_284_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9367..10173
DNA (807bp) protein (269aa)
PTS system, IIC component n=6 Tax=Lactobacillus rhamnosus RepID=C7TGJ0_LACRL
pts; PTS system transporter subunit IIC
Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIC {ECO:0000313|EMBL:EKS53930.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L1_007_029G1_scaffold_284_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10166..10987
DNA (822bp) protein (274aa)
PTS system, IID component n=5 Tax=Lactobacillus rhamnosus RepID=C7TGJ1_LACRL
levG; PTS system transporter subunit IID
PTS system, IID component {ECO:0000313|EMBL:AGP73177.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11023..13272
DNA (2250bp) protein (750aa)
Glycoside hydrolase, family 31 n=5 Tax=Lactobacillus rhamnosus RepID=C7TGJ2_LACRL
Maltodextrin glucosidase
Maltodextrin glucosidase {ECO:0000313|EMBL:AGP73178.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13396..13812
DNA (417bp) protein (139aa)
PTS system mannose-specific IIA component {ECO:0000313|EMBL:EKS53933.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EKS53933.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
PTS system, IIA component n=7 Tax=Lactobacillus rhamnosus RepID=C7TGJ3_LACRL
PTS system, mannose-specific IIA component
L1_007_029G1_scaffold_284_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13802..15490
DNA (1689bp) protein (563aa)
Trehalose-6-phosphate hydrolase (Alpha,alpha-phosphotrehalase) n=5 Tax=Lactobacillus rhamnosus RepID=C7TGJ4_LACRL
Oligo-1,6-glucosidase {ECO:0000313|EMBL:KIC96781.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
treC; trehalose-6-phosphate hydrolase
L1_007_029G1_scaffold_284_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15557..16363)
DNA (807bp) protein (269aa)
Streptomycin 3''-adenylyltransferase {ECO:0000256|PIRNR:PIRNR000819}; EC=2.7.7.47 {ECO:0000256|PIRNR:PIRNR000819};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6ALU6_LACRH
nucleotidyltransferase
L1_007_029G1_scaffold_284_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16442..16570)
DNA (129bp) protein (43aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S5A8Z9_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79139.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_284_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16731..17621)
DNA (891bp) protein (297aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TGJ6_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79140.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_284_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18160..18255
DNA (96bp) protein (32aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=U2GX75_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EGF47230.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
L1_007_029G1_scaffold_284_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18615..18710
DNA (96bp) protein (32aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=U2GX75_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EGF47230.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
L1_007_029G1_scaffold_284_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19102..19383
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=C2K0W5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN79141.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L1_007_029G1_scaffold_284_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19362..20219
DNA (858bp) protein (286aa)
Lipoprotein n=4 Tax=Lactobacillus rhamnosus RepID=C7TGJ7_LACRL
Methionine ABC transporter substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_284_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20430..21446
DNA (1017bp) protein (339aa)
Choloylglycine hydrolase n=5 Tax=Lactobacillus rhamnosus RepID=C7TGJ8_LACRL
linear amide C-N hydrolase, choloylglycine hydrolase family protein
Choloylglycine hydrolase {ECO:0000313|EMBL:KIC99025.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_029G1_scaffold_284_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21625..22590)
DNA (966bp) protein (322aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TGJ9_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73186.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_029G1_scaffold_284_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22861..24555)
DNA (1695bp) protein (565aa)
Oxidoreductase Myosin-crossreactive antigen ortholog n=4 Tax=Lactobacillus rhamnosus RepID=C7TGK0_LACRL
putative oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EEN79145.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_029G1_scaffold_284_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24567..24698)
DNA (132bp) protein (44aa)
Conserved protein n=12 Tax=Lactobacillus rhamnosus RepID=C7T9V6_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73188.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying 27 items

View Taxonomy