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L1_007_029G1_scaffold_347

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_347_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..272
DNA (270bp) protein (90aa)
Fe2+/Zn2+ uptake regulation protein n=18 Tax=Bifidobacterium RepID=B3DT62_BIFLD
metal uptake regulator
Probable metal uptake regulator similar to ferric uptake regulator protein {ECO:0000313|EMBL:AAN24935.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_347_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(307..522)
DNA (216bp) protein (72aa)
Uncharacterized protein n=17 Tax=Bifidobacterium RepID=Q8G590_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ22384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_347_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(497..652)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E823_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54167.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
ABC transporter
L1_007_029G1_scaffold_347_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

784..1653
DNA (870bp) protein (290aa)
ABC-type metal ion transport system periplasmic component n=9 Tax=Bifidobacterium RepID=B3DT60_BIFLD
lraI2; lrai2
ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAP83189.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_029G1_scaffold_347_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1914..3989
DNA (2076bp) protein (692aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSA4_BIFL1
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70648.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
hypothetical protein
L1_007_029G1_scaffold_347_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4110..5747
DNA (1638bp) protein (546aa)
Aldehyde dehydrogenase n=7 Tax=Bifidobacterium RepID=E8MHA4_BIFL2
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_347_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6121..7389)
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Phosphoribosylamine--glycine ligase n=16 Tax=Bifidobacterium RepID=B3DT57_BIFLD
phosphoribosylamine-glycine ligase
L1_007_029G1_scaffold_347_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7416..8453)
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I247_BIFLN
purM; purm
L1_007_029G1_scaffold_347_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8573..10084)
DNA (1512bp) protein (504aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Amidophosphoribosyltransferase n=3 Tax=Bifidobacterium longum RepID=B3DT55_BIFLD
purF; glutamine phosphoribosylpyrophosphate amidotransferase
L1_007_029G1_scaffold_347_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10489..11274)
DNA (786bp) protein (262aa)
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) n=15 Tax=Bifidobacterium RepID=D6D9I2_BIFLN
amino acid ABC transporter ATP-binding protein
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43481.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_347_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11271..12158)
DNA (888bp) protein (296aa)
Permease of the ABC transporter n=5 Tax=Bifidobacterium RepID=V6XZX2_BIFLN
amino acid ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY23242.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_347_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12268..13131)
DNA (864bp) protein (288aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I047_BIFLN
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:CCK34535.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hisJ4; amino acid ABC transporter/signal transduction systems periplasmic protein
L1_007_029G1_scaffold_347_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13333..13803)
DNA (471bp) protein (157aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G599_BIFLO
hypothetical protein
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIJ22380.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_347_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13873..15246)
DNA (1374bp) protein (458aa)
Cytosine deaminase n=17 Tax=Bifidobacterium RepID=B3DT50_BIFLD
chlorohydrolase
Cytosine deaminase {ECO:0000313|EMBL:KEY32520.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_347_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15286..16788)
DNA (1503bp) protein (501aa)
S-adenosyl-L-homocysteine hydrolase n=6 Tax=Bifidobacterium RepID=E8MHB3_BIFL2
S-adenosyl-L-homocysteine hydrolase
S-adenosyl-L-homocysteine hydrolase {ECO:0000313|EMBL:BAJ66166.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_347_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16953..18542
DNA (1590bp) protein (530aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G5A2_BIFLO
ImpB/MucB/SamB family protein involved in DNA repair {ECO:0000313|EMBL:ESV33109.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L1_007_029G1_scaffold_347_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18539..18757
DNA (219bp) protein (73aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=V6XV04_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81139.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_347_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18791..19768)
DNA (978bp) protein (326aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=13 Tax=Bifidobacterium RepID=D6D9H6_BIFLN
hypothetical protein
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEQ54152.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_347_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19876..20841)
DNA (966bp) protein (322aa)
Transcriptional regulator n=8 Tax=Bifidobacterium longum RepID=E8MHB7_BIFL2
transcriptional regulator
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ32323.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_347_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21060..22574
DNA (1515bp) protein (505aa)
Transporter, NhaC family (TC 2.A.35) n=9 Tax=Bifidobacterium RepID=D6D9H4_BIFLN
nhaC; nhac
Possible Na(+)/H(+) antiporter {ECO:0000313|EMBL:AAN24918.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_347_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22588..23247)
DNA (660bp) protein (220aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=C5E802_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95163.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_347_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23244..23564)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDC2_9BIFI
hypothetical protein
Alcohol acetyltransferase {ECO:0000313|EMBL:KEY23231.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying 22 items

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