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L1_007_029G1_scaffold_350

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_350_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67..1017)
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5EA98_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KEY32716.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_029G1_scaffold_350_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1102..2547)
DNA (1446bp) protein (482aa)
TrbL/VirB6 plasmid conjugal transfer domain protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYN1_BIFLN
TrbL/VirB6 plasmid conjugal transfer domain protein {ECO:0000313|EMBL:EIJ24224.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L1_007_029G1_scaffold_350_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2639..2977)
DNA (339bp) protein (113aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=C2GTZ3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCY95889.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_029G1_scaffold_350_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3047..3721)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTZ2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81348.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L1_007_029G1_scaffold_350_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3965..5401)
DNA (1437bp) protein (479aa)
TraG-like protein (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFF6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95887.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_350_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5506..6366
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYM5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ24218.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_350_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6332..6649
DNA (318bp) protein (106aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYM3_BIFLN
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EIJ24216.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L1_007_029G1_scaffold_350_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6640..6936
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C2GTY8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY21992.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L1_007_029G1_scaffold_350_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7131..7316)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5NET6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95881.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_029G1_scaffold_350_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7408..8004)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VS43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35580.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_007_029G1_scaffold_350_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7958..8584)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97628.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_029G1_scaffold_350_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8804..9886
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYM7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ24220.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_350_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9911..11275)
DNA (1365bp) protein (455aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GTY5_BIFLN
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEI81365.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
phage integrase family protein
L1_007_029G1_scaffold_350_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11677..12462
DNA (786bp) protein (262aa)
AmiR n=14 Tax=Bifidobacterium RepID=E4QZD4_BIFLM
amiR; amir
Chemotaxis protein CheY {ECO:0000313|EMBL:KEY32726.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_350_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12508..15375
DNA (2868bp) protein (956aa)
DNA polymerase I {ECO:0000313|EMBL:CBK70717.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK70717.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=3 Tax=Bifidobacterium longum RepID=B3DSR5_BIFLD
L1_007_029G1_scaffold_350_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15545..16465
DNA (921bp) protein (307aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Putative GTP cyclohydrolase 1 type 2 n=11 Tax=Bifidobacterium longum RepID=B3DSR4_BIFLD
hypothetical protein
L1_007_029G1_scaffold_350_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16511..17185
DNA (675bp) protein (225aa)
NTP pyrophosphohydrolase including oxidative damage repair enzyme n=11 Tax=Bifidobacterium RepID=B3DSR3_BIFLD
mutT1; NTP pyrophosphohydrolase
NUDIX domain protein {ECO:0000313|EMBL:CCK34675.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_029G1_scaffold_350_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17259..19379
DNA (2121bp) protein (707aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Glycogen debranching enzyme GlgX n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTY0_BIFLN
glycogen debranching protein GlgX
L1_007_029G1_scaffold_350_19
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19517..19717
DNA (201bp) protein (67aa)
SoxR-type transcriptional regulator n=4 Tax=Bacteria RepID=B3DSR1_BIFLD
transcriptional regulator
SoxR-type transcriptional regulator {ECO:0000313|EMBL:EFV38086.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_029G1_scaffold_350_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19866..20351
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSQ5_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70799.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_029G1_scaffold_350_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20355..21005
DNA (651bp) protein (217aa)
Uncharacterized conserved protein n=11 Tax=Bifidobacterium RepID=D6D959_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24788.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_350_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21175..21729)
DNA (555bp) protein (185aa)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:EEQ54962.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EEQ54962.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA-3-methyladenine glycosylase I n=8 Tax=Bacteria RepID=D6D958_BIFLN
glycosylase
L1_007_029G1_scaffold_350_23
unknown

Not on your lists

22406..23260
DNA (855bp) protein (285aa)

This feature has no annotations

L1_007_029G1_scaffold_350_24
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23277..24695)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTN4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22033.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L1_007_029G1_scaffold_350_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24748..26097)
DNA (1350bp) protein (450aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Cytosine-specific methyltransferase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HY76_BIFBI
DNA-cytosine methyltransferase
L1_007_029G1_scaffold_350_26
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26236..27429
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTN6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22035.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L1_007_029G1_scaffold_350_27
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27510..27788)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTN7_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEB22036.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L1_007_029G1_scaffold_350_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27856..28620)
DNA (765bp) protein (255aa)
Phage lysin-like lysozyme M1 n=2 Tax=Bifidobacterium longum RepID=B3DTW2_BIFLD
glycosyl hydrolases family 25,lysozyme
Phage lysin-like lysozyme M1 {ECO:0000313|EMBL:ACD98581.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_350_29
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28651..30483
DNA (1833bp) protein (611aa)
DNA primase/polymerase n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SCX4_9BIFI
Phage primase {ECO:0000313|EMBL:KFI50594.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
phage primase
L1_007_029G1_scaffold_350_30
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30480..30914
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECM2_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KFI49770.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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