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L1_007_029G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_358_1
unknown

Not on your lists

comp(298..441)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_007_029G1_scaffold_358_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(761..1102)
DNA (342bp) protein (114aa)
Formate-tetrahydrofolate ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0L1_9BIFI
formate-tetrahydrofolate ligase
Formate--tetrahydrofolate ligase domain protein {ECO:0000313|EMBL:EIJ30950.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_358_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1134..2204)
DNA (1071bp) protein (357aa)
Formate-tetrahydrofolate ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0L1_9BIFI
formate-tetrahydrofolate ligase
Formate--tetrahydrofolate ligase {ECO:0000313|EMBL:KEY23904.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_029G1_scaffold_358_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2336..3937)
DNA (1602bp) protein (534aa)
Dipeptidase {ECO:0000313|EMBL:EEI81603.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEI81603.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Dipeptidase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GSS4_BIFLN
dipeptidase
L1_007_029G1_scaffold_358_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4080..4634)
DNA (555bp) protein (185aa)
Phospholipid-binding protein n=6 Tax=Bifidobacterium RepID=F8AU43_BIFLN
phospholipid-binding protein
Raf-like protein {ECO:0000313|EMBL:EEQ54541.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_358_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4753..5904)
DNA (1152bp) protein (384aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EEQ54542.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEQ54542.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA polymerase III delta' subunit n=8 Tax=Bifidobacterium longum RepID=E8MGC1_BIFL2
DNA polymerase III delta' subunit
L1_007_029G1_scaffold_358_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5901..6521)
DNA (621bp) protein (207aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:CBK71218.1}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:CBK71218.1};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Thymidylate kinase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAL5_BIFLN
L1_007_029G1_scaffold_358_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6762..8585)
DNA (1824bp) protein (608aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA topoisomerase 1 n=8 Tax=Bifidobacterium RepID=Q8G6Z5_BIFLO
DNA topoisomerase I
L1_007_029G1_scaffold_358_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8612..9757)
DNA (1146bp) protein (382aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
DNA topoisomerase 1 n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HYV7_BIFLN
DNA topoisomerase I
L1_007_029G1_scaffold_358_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9881..10846)
DNA (966bp) protein (322aa)
Peptidase n=15 Tax=Bifidobacterium RepID=F8AU47_BIFLN
peptidase
Phosphoesterase {ECO:0000313|EMBL:KEY31883.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_358_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11410..13815
DNA (2406bp) protein (802aa)
Transglycosylase n=7 Tax=Bifidobacterium RepID=C5E9D8_BIFLI
Transglycosylase {ECO:0000313|EMBL:EEQ54547.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
penicillin-binding protein
L1_007_029G1_scaffold_358_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13887..14834)
DNA (948bp) protein (316aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
2-isopropylmalate synthase n=2 Tax=Bifidobacterium longum RepID=E8MGB6_BIFL2
2-isopropylmalate synthase
L1_007_029G1_scaffold_358_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14782..15663)
DNA (882bp) protein (294aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Putative 2-isopropylmalate synthase (Fragment) n=1 Tax=Streptococcus pyogenes GA19700 RepID=U9X2M8_STRPY
2-isopropylmalate synthase
L1_007_029G1_scaffold_358_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16155..17621)
DNA (1467bp) protein (489aa)
Phosphohydrolase n=6 Tax=Bifidobacterium longum RepID=F8AU50_BIFLN
phosphohydrolase
Ser/Thr phosphatase domain protein {ECO:0000313|EMBL:EIJ30895.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_029G1_scaffold_358_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17712..17882)
DNA (171bp) protein (57aa)
PASTA domain protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BHR6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98726.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_358_16
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17956..18576)
DNA (621bp) protein (207aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DUA8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95995.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_358_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18744..19838
DNA (1095bp) protein (365aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EIJ23042.1}; EC=1.2.1.11 {ECO:0000313|EMBL:EIJ23042.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Aspartate semialdehyde dehydrogenase n=16 Tax=Bacteria RepID=D6DAM1_BIFLN
aspartate-semialdehyde dehydrogenase
L1_007_029G1_scaffold_358_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19920..20486)
DNA (567bp) protein (189aa)
Aspartokinase n=17 Tax=Bifidobacterium RepID=B3DUB0_BIFLD
aspartate kinase
Aspartokinase {ECO:0000313|EMBL:ACD98729.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_358_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20542..21306)
DNA (765bp) protein (255aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Aspartokinase n=16 Tax=Bifidobacterium RepID=B3DUB1_BIFLD
aspartate kinase
L1_007_029G1_scaffold_358_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21667..22950)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=V6XU52_BIFLN
aaa+ superfamily atpase
ATPase AAA {ECO:0000313|EMBL:KEY31892.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_358_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23201..23497)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0J3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFV36608.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L1_007_029G1_scaffold_358_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23860..24993
DNA (1134bp) protein (378aa)
SrtA1 n=2 Tax=Bifidobacterium longum RepID=E4R0T7_BIFLM
srtA1; srta1
Possible sortase-like protein {ECO:0000313|EMBL:AAN24327.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_358_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24990..25592)
DNA (603bp) protein (201aa)
Recombination protein RecR n=18 Tax=Bifidobacterium RepID=RECR_BIFLD
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_029G1_scaffold_358_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25618..28530)
DNA (2913bp) protein (971aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:ESV32759.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ESV32759.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=2 Tax=Bifidobacterium longum RepID=Q8G6Y0_BIFLO
L1_007_029G1_scaffold_358_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28725..29324
DNA (600bp) protein (200aa)
AcrR-type transcriptional regulator n=7 Tax=Bifidobacterium longum RepID=B3DUB6_BIFLD
Transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEQ54562.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_029G1_scaffold_358_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29522..30652)
DNA (1131bp) protein (377aa)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HYX7_BIFLN
sphK1; sphk1
Diacylglycerol kinase catalytic domain protein {ECO:0000313|EMBL:CCK34097.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_029G1_scaffold_358_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30701..31051)
DNA (351bp) protein (117aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=Q8G6X7_BIFLO
hypothetical protein
OppA3 {ECO:0000313|EMBL:CCY96158.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_029G1_scaffold_358_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31128..31505)
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=B3DUB9_BIFLD
TadE-like protein.
Uncharacterized protein {ECO:0000313|EMBL:AAN24333.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_029G1_scaffold_358_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31511..31798)
DNA (288bp) protein (96aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=Q8G6X5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43181.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_358_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32083..32685)
DNA (603bp) protein (201aa)
TadC n=2 Tax=Bifidobacterium RepID=E4R0U5_BIFLM
Uncharacterized protein {ECO:0000313|EMBL:KEY23927.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
tadC; tadc
Displaying items 1-30 of 34 in total

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