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L1_007_029G1_scaffold_386

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_386_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..171)
DNA (171bp) protein (57aa)
GalK n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R022_BIFLM
galK; galactokinase
Galactokinase {ECO:0000313|EMBL:ACJ53126.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_029G1_scaffold_386_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(188..1438)
DNA (1251bp) protein (417aa)
UTP--hexose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:EEQ54261.1}; EC=2.7.7.10 {ECO:0000313|EMBL:EEQ54261.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E863_BIFLI
galactose-1-phosphate uridylyltransferase
L1_007_029G1_scaffold_386_3
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1443..2246)
DNA (804bp) protein (268aa)
DeoR family Bacterial regulatory protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYB4_9BIFI
DeoR family Bacterial regulatory protein {ECO:0000313|EMBL:EFV37418.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Transcriptional regulator, DeoR family
L1_007_029G1_scaffold_386_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2467..3618
DNA (1152bp) protein (384aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Dihydroorotate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS13_BIFL1
dihydroorotate dehydrogenase
L1_007_029G1_scaffold_386_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3786..5150)
DNA (1365bp) protein (455aa)
NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9R5_BIFLN
NADH:flavin oxidoreductases, Old Yellow Enzyme family
NADH:flavin oxidoreductases, Old Yellow Enzyme family {ECO:0000313|EMBL:CBK70918.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_029G1_scaffold_386_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5342..7648)
DNA (2307bp) protein (769aa)
Possible penicillin-binding protein n=11 Tax=Bifidobacterium RepID=Q8G503_BIFLO
penicillin-binding protein
Carboxypeptidase {ECO:0000313|EMBL:AIW43387.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_029G1_scaffold_386_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7761..8480)
DNA (720bp) protein (240aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GUX4_BIFLN
Crp/Fnr family transcriptional regulator
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EEI81251.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_386_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8720..9520)
DNA (801bp) protein (267aa)
Biotin/lipoate A/B protein ligase family protein {ECO:0000313|EMBL:EIJ30334.1}; EC=6.3.-.- {ECO:0000313|EMBL:EIJ30334.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Biotin/lipoate A/B protein ligase family protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B9D1_BIFLN
lipoate protein ligase
L1_007_029G1_scaffold_386_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9863..10894)
DNA (1032bp) protein (344aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CBK70921.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CBK70921.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
3-isopropylmalate dehydrogenase n=16 Tax=Bifidobacterium RepID=LEU3_BIFLD
3-isopropylmalate dehydrogenase
L1_007_029G1_scaffold_386_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10959..13442)
DNA (2484bp) protein (828aa)
Oligopeptidase B . Serine peptidase. MEROPS family S09A n=13 Tax=Bifidobacterium RepID=D6D9R9_BIFLN
Protease II {ECO:0000313|EMBL:AAN25026.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
protease
L1_007_029G1_scaffold_386_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13536..14708)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=Q8G4Z8_BIFLO
hypothetical protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY33202.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_029G1_scaffold_386_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14986..15393)
DNA (408bp) protein (136aa)
Glycine cleavage system H protein n=18 Tax=root RepID=GCSH_BIFLO
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_029G1_scaffold_386_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15425..16717)
DNA (1293bp) protein (431aa)
Npy1 n=3 Tax=Bifidobacterium RepID=E4R034_BIFLM
NADH pyrophosphatase {ECO:0000313|EMBL:KHD95880.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
npy1; npy1
L1_007_029G1_scaffold_386_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16727..17584)
DNA (858bp) protein (286aa)
PePR1 n=12 Tax=root RepID=E4R035_BIFLM
Alpha/beta hydrolase {ECO:0000313|EMBL:KHD95879.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
pepR1; pepr1
L1_007_029G1_scaffold_386_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17712..18335)
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3ATW0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98433.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_386_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18600..18974
DNA (375bp) protein (125aa)
Thioredoxin n=14 Tax=root RepID=B3DTG5_BIFLD
thioredoxin domain-containing protein
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_029G1_scaffold_386_17
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19044..20039
DNA (996bp) protein (332aa)
G5 domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYF8_9BIFI
G5 domain-containing protein {ECO:0000313|EMBL:EFV37432.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L1_007_029G1_scaffold_386_18

Not on your lists

comp(20139..20663)
DNA (525bp) protein (175aa)
Transposase domain protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B9C5_BIFLN
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61572.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
transposase
Displaying 18 items

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