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L1_007_029G1_scaffold_399

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_399_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51..500)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I110_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK34922.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_007_029G1_scaffold_399_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

754..1245
DNA (492bp) protein (164aa)
Helix-turn-helix domain-containing protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0R6_BIFLN
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CCK34924.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_007_029G1_scaffold_399_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1558..2391)
DNA (834bp) protein (278aa)
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:CCK34927.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CCK34927.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Type I restriction modification DNA specificity domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I112_BIFLN
restriction modification system DNA specificity domain-containing protein
L1_007_029G1_scaffold_399_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2424..3398
DNA (975bp) protein (325aa)
Phage integrase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I374_BIFLN
Phage integrase family protein {ECO:0000313|EMBL:CCK34926.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
phage integrase family protein
L1_007_029G1_scaffold_399_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3395..3955
DNA (561bp) protein (187aa)
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:CCK34927.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CCK34927.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Type I restriction modification DNA specificity domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I112_BIFLN
putative type I restriction-modification system specificity subunit
L1_007_029G1_scaffold_399_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3903..5051)
DNA (1149bp) protein (383aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DNZ7_BIFBI
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:ERI83282.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L1_007_029G1_scaffold_399_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5041..6546)
DNA (1506bp) protein (502aa)
N-6 DNA Methylase family protein {ECO:0000313|EMBL:CCK34928.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCK34928.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
N-6 DNA Methylase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1U9_BIFLN
L1_007_029G1_scaffold_399_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6550..9654)
DNA (3105bp) protein (1035aa)
Type I site-specific deoxyribonuclease, HsdR family protein {ECO:0000313|EMBL:CCK34929.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CCK34929.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0R9_BIFLN
L1_007_029G1_scaffold_399_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9812..10096)
DNA (285bp) protein (95aa)
Putative membrane protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I193_BIFLN
Putative membrane protein {ECO:0000313|EMBL:CCK34930.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_007_029G1_scaffold_399_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10184..11239)
DNA (1056bp) protein (352aa)
glycosyl hydrolases family 25,lysozyme (EC:3.2.1.17)
Glycosyl hydrolases 25 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I376_BIFLN
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:CCK34931.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_029G1_scaffold_399_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11335..11688)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I116_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK34932.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_007_029G1_scaffold_399_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11685..12977)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1V2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK34933.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_007_029G1_scaffold_399_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12987..13829)
DNA (843bp) protein (281aa)
Wiskott-Aldrich syndrome-like protein 1 n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0S2_BIFLN
Wiskott-Aldrich syndrome-like protein 1 {ECO:0000313|EMBL:CCK34934.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Phage minor structural protein
L1_007_029G1_scaffold_399_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14012..14959)
DNA (948bp) protein (316aa)
Alcohol dehydrogenase n=4 Tax=Bifidobacterium longum RepID=E8MI74_BIFL2
alcohol dehydrogenase
GroES-like protein {ECO:0000313|EMBL:EEI80173.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_029G1_scaffold_399_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15195..16130)
DNA (936bp) protein (312aa)
Lipase/esterase n=4 Tax=Bifidobacterium RepID=E8MI75_BIFL2
lipase/esterase
Esterase LipC {ECO:0000313|EMBL:CCK34937.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_029G1_scaffold_399_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16387..17346
DNA (960bp) protein (320aa)
Oxidoreductase n=2 Tax=Bifidobacterium longum RepID=S3EMG1_BIFLN
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAJ66479.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_029G1_scaffold_399_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17387..18025)
DNA (639bp) protein (213aa)
Phospholipase/carboxylesterase n=4 Tax=Bifidobacterium RepID=R5MYV5_9BIFI
Phospholipase/carboxylesterase {ECO:0000313|EMBL:CCY94859.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
esterase
L1_007_029G1_scaffold_399_18
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18102..19172
DNA (1071bp) protein (357aa)
tRNA(1-methyladenosine) methyltransferase and related methyltransferases n=8 Tax=Bifidobacterium RepID=D6DDI4_BIFLN
methyltransferase
tRNA (Adenine-N1-)-methyltransferase {ECO:0000313|EMBL:EFV36843.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_029G1_scaffold_399_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19278..19835
DNA (558bp) protein (186aa)
Phosphohistidine phosphatase n=13 Tax=Bifidobacterium RepID=B3DS66_BIFLD
phosphoglycerate
Phosphohistidine phosphatase {ECO:0000313|EMBL:ACD97985.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_029G1_scaffold_399_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19946..20380
DNA (435bp) protein (145aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MTI4_BIFL1
metE; mete
Displaying 20 items

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