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L1_007_029G1_scaffold_434

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_434_1
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..1264
DNA (1263bp) protein (421aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Ribosomal protein S12 methylthiotransferase RimO n=4 Tax=Veillonella RepID=D1YS23_9FIRM
MiaB-like tRNA modifying enzyme YliG
L1_007_029G1_scaffold_434_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1302..2549
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KII7_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
competence/damage-inducible protein CinA
L1_007_029G1_scaffold_434_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2554..3594
DNA (1041bp) protein (347aa)
Protein RecA n=3 Tax=Veillonella RepID=T0UFD6_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
recA protein
L1_007_029G1_scaffold_434_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3597..4040
DNA (444bp) protein (148aa)
Regulatory protein RecX n=2 Tax=Veillonella RepID=D1YS20_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
regulatory protein RecX
L1_007_029G1_scaffold_434_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4159..5760
DNA (1602bp) protein (534aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribonuclease Y n=4 Tax=Veillonella parvula RepID=T0T3U2_9FIRM
RNA binding metal dependent phosphohydrolase
L1_007_029G1_scaffold_434_6
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5995..7788
DNA (1794bp) protein (598aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
DNA primase n=2 Tax=Veillonella RepID=D6KNN2_9FIRM
DNA primase
L1_007_029G1_scaffold_434_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7796..8977
DNA (1182bp) protein (394aa)
RNA polymerase sigma factor SigA n=5 Tax=Veillonella RepID=D1BNB8_VEIPT
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L1_007_029G1_scaffold_434_8
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9183..9521
DNA (339bp) protein (113aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=5 Tax=Veillonella RepID=C4FPK8_9FIRM
6-pyruvoyl-tetrahydropterin synthase
L1_007_029G1_scaffold_434_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9508..10254
DNA (747bp) protein (249aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2V1_9FIRM
radical SAM protein
L1_007_029G1_scaffold_434_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10336..10899
DNA (564bp) protein (188aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D62C98 related cluster n=1 Tax=unknown RepID=UPI0003D62C98
GTP cyclohydrolase I
L1_007_029G1_scaffold_434_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11298..12029
DNA (732bp) protein (244aa)
UPI0003D65E36 related cluster n=1 Tax=unknown RepID=UPI0003D65E36
Uncharacterized protein {ECO:0000313|EMBL:ETI97102.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L1_007_029G1_scaffold_434_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12036..13148
DNA (1113bp) protein (371aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D5A782 related cluster n=1 Tax=unknown RepID=UPI0003D5A782
hypothetical protein
L1_007_029G1_scaffold_434_13
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13606..13935
DNA (330bp) protein (110aa)
Thioredoxin n=5 Tax=Veillonella RepID=D1BNB2_VEIPT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L1_007_029G1_scaffold_434_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13957..14142)
DNA (186bp) protein (62aa)
UPI0003D64ED0 related cluster n=1 Tax=unknown RepID=UPI0003D64ED0
Uncharacterized protein {ECO:0000313|EMBL:ETI97099.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L1_007_029G1_scaffold_434_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14209..15348
DNA (1140bp) protein (380aa)
Uptake hydrogenase small subunit {ECO:0000313|EMBL:EFB85383.1}; EC=1.12.99.6 {ECO:0000313|EMBL:EFB85383.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Uptake hydrogenase small subunit n=5 Tax=Veillonella RepID=D1YS10_9FIRM
hydrogenase (NiFe) small subunit HydA
L1_007_029G1_scaffold_434_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15348..17249
DNA (1902bp) protein (634aa)
UPI0003D6146D related cluster n=1 Tax=unknown RepID=UPI0003D6146D
Nickel-iron hydrogenase, large subunit {ECO:0000313|EMBL:ETI97097.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
nickel-dependent hydrogenase large subunit
L1_007_029G1_scaffold_434_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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17264..18073
DNA (810bp) protein (270aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=2 Tax=Veillonella RepID=D1BNA9_VEIPT
Ni/Fe-hydrogenase, b-type cytochrome subunit
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:ACZ24866.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L1_007_029G1_scaffold_434_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18036..18644
DNA (609bp) protein (203aa)
Hydrogenase expression/formation protein n=3 Tax=Veillonella RepID=D6KNM1_9FIRM
Hydrogenase maturation protease {ECO:0000313|EMBL:ETI97095.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hydrogenase maturation protease
L1_007_029G1_scaffold_434_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18713..19090
DNA (378bp) protein (126aa)
HupH hydrogenase expression protein, C-terminal conserved region n=2 Tax=Veillonella parvula RepID=D1YS06_9FIRM
HupH hydrogenase expression protein, C-terminal conserved region {ECO:0000313|EMBL:EFB85379.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
Displaying 19 items

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