ggKbase home page

L1_007_029G1_scaffold_443

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_029G1_scaffold_443_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..378)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZXC3_BIFBR
ATP-binding protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD74697.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_443_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(853..2169)
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=4 Tax=Bifidobacterium breve RepID=F6C9Y9_BIFBA
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AHJ19079.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_029G1_scaffold_443_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2782..3654
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=S2ZK18_BIFBR
Pyridoxine kinase
L1_007_029G1_scaffold_443_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3754..3981)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00036FD9F9
Uncharacterized protein {ECO:0000313|EMBL:ERI86395.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L1_007_029G1_scaffold_443_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4186..4452
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BNY2_BIFBR
Transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD74694.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_029G1_scaffold_443_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4670..5044
DNA (375bp) protein (125aa)
UPF0102 protein BIFBRE_03788 n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNY0_BIFBR
Endonuclease
UPF0102 protein BBBR_0773 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_443_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5059..6594
DNA (1536bp) protein (512aa)
Mg chelatase-like protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2Y1_BIFBR
magnesium chelatase subunit ChlI-like ATPase
Mg chelatase-like protein {ECO:0000313|EMBL:EFE89366.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99810.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_443_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6591..8210
DNA (1620bp) protein (540aa)
DNA protecting protein DprA n=3 Tax=Bifidobacterium breve RepID=S2ZE92_BIFBR
Smf protein {ECO:0000313|EMBL:AHJ19074.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Smf protein
L1_007_029G1_scaffold_443_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8273..10174
DNA (1902bp) protein (634aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=4 Tax=Bifidobacterium breve RepID=D4BNX7_BIFBR
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:BAQ99808.1}; Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EFE89364.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
L1_007_029G1_scaffold_443_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10247..11197
DNA (951bp) protein (317aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=3 Tax=Bifidobacterium breve RepID=F6C9Z6_BIFBA
Succinate dehydrogenase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EFE89363.1}; Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:BAQ99807.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_443_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11260..11925
DNA (666bp) protein (222aa)
O-methyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C9Z7_BIFBA
Caffeoyl-CoA O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:AEF28071.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_443_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11966..12868)
DNA (903bp) protein (301aa)
Lysine decarboxylase family n=4 Tax=Bifidobacterium breve RepID=F9XYN3_BIFBU
Lysine decarboxylase family
TIGR00730 family protein {ECO:0000313|EMBL:EFE89361.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99805.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_443_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12907..14295)
DNA (1389bp) protein (463aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bifidobacterium breve RepID=D4BNX3_BIFBR
Na/H antiporter nhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_029G1_scaffold_443_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14375..15580)
DNA (1206bp) protein (402aa)
Putative hemolysin n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXD4_BIFBR
Cystathionine beta-lyase
Putative hemolysin {ECO:0000313|EMBL:ERI86307.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_443_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15973..17334)
DNA (1362bp) protein (454aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=5 Tax=Bifidobacterium breve RepID=F9XYN0_BIFBU
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_029G1_scaffold_443_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17508..18191)
DNA (684bp) protein (228aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNX0_BIFBR
ATP-dependent Clp protease proteolytic subunit
L1_007_029G1_scaffold_443_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18197..18715)
DNA (519bp) protein (173aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
ATP-dependent Clp protease proteolytic subunit n=7 Tax=Bifidobacterium breve RepID=F9XYM8_BIFBU
ATP-dependent Clp protease proteolytic subunit
L1_007_029G1_scaffold_443_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18859..19236)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6CA04_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20974.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_029G1_scaffold_443_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19281..20681)
DNA (1401bp) protein (467aa)
Chloride transporter, chloride channel family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2Z3_BIFBR
Chloride channel protein
Chloride transporter, ClC family {ECO:0000313|EMBL:ERI86312.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_029G1_scaffold_443_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20865..22238)
DNA (1374bp) protein (458aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Trigger factor n=3 Tax=Bifidobacterium breve RepID=F9XYM5_BIFBU
Trigger factor, ppiase
L1_007_029G1_scaffold_443_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22240..23436)
DNA (1197bp) protein (399aa)
Ribonuclease D (EC:3.1.26.3)
Ribonuclease D {ECO:0000313|EMBL:ABE95475.1}; EC=3.1.26.3 {ECO:0000313|EMBL:ABE95475.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribonuclease D n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYM4_BIFBU
L1_007_029G1_scaffold_443_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23433..24065)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYM3_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95474.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_029G1_scaffold_443_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24248..25129)
DNA (882bp) protein (294aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Pyruvate formate-lyase 1-activating enzyme n=6 Tax=Bifidobacterium breve RepID=F6CA09_BIFBA
Pyruvate formate-lyase activating enzyme
L1_007_029G1_scaffold_443_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25242..25436)
DNA (195bp) protein (65aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=2 Tax=Bifidobacterium breve RepID=F6CA10_BIFBA
Formate acetyltransferase {ECO:0000313|EMBL:KEY32759.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Displaying 24 items

View Taxonomy